Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGCLL1Q8TB92 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.63■□□□□ 0.41
HMGCLL1Q8TB92 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HMGCLL1Q8TB92 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGCLL1Q8TB92 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGCLL1Q8TB92 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.63■□□□□ 0.41
HMGCLL1Q8TB92 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HMGCLL1Q8TB92 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
HMGCLL1Q8TB92 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCLL1Q8TB92 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCLL1Q8TB92 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCLL1Q8TB92 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
HMGCLL1Q8TB92 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCLL1Q8TB92 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
HMGCLL1Q8TB92 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
HMGCLL1Q8TB92 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.62■□□□□ 0.41
HMGCLL1Q8TB92 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCLL1Q8TB92 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
HMGCLL1Q8TB92 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.62■□□□□ 0.41
HMGCLL1Q8TB92 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.62■□□□□ 0.41
HMGCLL1Q8TB92 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.62■□□□□ 0.41
HMGCLL1Q8TB92 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCLL1Q8TB92 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCLL1Q8TB92 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCLL1Q8TB92 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCLL1Q8TB92 AL645929.1-201ENST00000420084 975 ntBASIC17.62■□□□□ 0.41
HMGCLL1Q8TB92 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
HMGCLL1Q8TB92 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.62■□□□□ 0.41
HMGCLL1Q8TB92 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.62■□□□□ 0.41
HMGCLL1Q8TB92 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.62■□□□□ 0.41
HMGCLL1Q8TB92 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.62■□□□□ 0.41
HMGCLL1Q8TB92 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.62■□□□□ 0.41
HMGCLL1Q8TB92 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.62■□□□□ 0.41
HMGCLL1Q8TB92 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
HMGCLL1Q8TB92 AC005332.1-201ENST00000577698 1310 ntBASIC17.62■□□□□ 0.41
HMGCLL1Q8TB92 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCLL1Q8TB92 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
HMGCLL1Q8TB92 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
HMGCLL1Q8TB92 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCLL1Q8TB92 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCLL1Q8TB92 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCLL1Q8TB92 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
HMGCLL1Q8TB92 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCLL1Q8TB92 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCLL1Q8TB92 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HMGCLL1Q8TB92 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.62■□□□□ 0.41
HMGCLL1Q8TB92 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.62■□□□□ 0.41
HMGCLL1Q8TB92 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCLL1Q8TB92 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
HMGCLL1Q8TB92 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCLL1Q8TB92 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.61■□□□□ 0.41
HMGCLL1Q8TB92 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCLL1Q8TB92 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
HMGCLL1Q8TB92 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCLL1Q8TB92 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCLL1Q8TB92 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCLL1Q8TB92 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCLL1Q8TB92 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.61■□□□□ 0.41
HMGCLL1Q8TB92 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCLL1Q8TB92 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCLL1Q8TB92 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCLL1Q8TB92 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCLL1Q8TB92 ARMC10P1-201ENST00000313754 855 ntBASIC17.61■□□□□ 0.41
HMGCLL1Q8TB92 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCLL1Q8TB92 IGHGP-201ENST00000390555 1178 ntBASIC17.61■□□□□ 0.41
HMGCLL1Q8TB92 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.61■□□□□ 0.41
HMGCLL1Q8TB92 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.61■□□□□ 0.41
HMGCLL1Q8TB92 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.61■□□□□ 0.41
HMGCLL1Q8TB92 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
HMGCLL1Q8TB92 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCLL1Q8TB92 AC116407.4-201ENST00000623319 1061 ntBASIC17.61■□□□□ 0.41
HMGCLL1Q8TB92 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCLL1Q8TB92 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.61■□□□□ 0.41
HMGCLL1Q8TB92 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
HMGCLL1Q8TB92 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCLL1Q8TB92 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
HMGCLL1Q8TB92 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCLL1Q8TB92 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.61■□□□□ 0.41
HMGCLL1Q8TB92 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCLL1Q8TB92 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCLL1Q8TB92 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.61■□□□□ 0.41
HMGCLL1Q8TB92 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.61■□□□□ 0.41
HMGCLL1Q8TB92 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
HMGCLL1Q8TB92 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCLL1Q8TB92 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.61■□□□□ 0.41
HMGCLL1Q8TB92 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCLL1Q8TB92 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMGCLL1Q8TB92 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
HMGCLL1Q8TB92 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMGCLL1Q8TB92 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.6■□□□□ 0.41
HMGCLL1Q8TB92 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
HMGCLL1Q8TB92 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HMGCLL1Q8TB92 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMGCLL1Q8TB92 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMGCLL1Q8TB92 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMGCLL1Q8TB92 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMGCLL1Q8TB92 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HMGCLL1Q8TB92 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.6■□□□□ 0.41
HMGCLL1Q8TB92 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HMGCLL1Q8TB92 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms