Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 OR6D1P-203ENST00000641209 4860 ntBASIC18.67■□□□□ 0.58
CCDC89Q8N998 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC89Q8N998 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC89Q8N998 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC89Q8N998 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC89Q8N998 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC89Q8N998 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC89Q8N998 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC89Q8N998 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CCDC89Q8N998 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC89Q8N998 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC89Q8N998 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC89Q8N998 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC89Q8N998 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC89Q8N998 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC89Q8N998 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC89Q8N998 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CCDC89Q8N998 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.66■□□□□ 0.58
CCDC89Q8N998 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC89Q8N998 EGLN1P1-201ENST00000531623 762 ntBASIC18.66■□□□□ 0.58
CCDC89Q8N998 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
CCDC89Q8N998 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC89Q8N998 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC89Q8N998 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC89Q8N998 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC89Q8N998 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC89Q8N998 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC89Q8N998 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC89Q8N998 AC108860.2-201ENST00000562760 2183 ntBASIC18.66■□□□□ 0.58
CCDC89Q8N998 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC89Q8N998 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.66■□□□□ 0.58
CCDC89Q8N998 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CCDC89Q8N998 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC89Q8N998 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC89Q8N998 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC89Q8N998 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC89Q8N998 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC89Q8N998 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC89Q8N998 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC89Q8N998 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC89Q8N998 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC89Q8N998 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC89Q8N998 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC89Q8N998 PP12613-201ENST00000424958 2230 ntBASIC18.65■□□□□ 0.58
CCDC89Q8N998 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CCDC89Q8N998 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC89Q8N998 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC89Q8N998 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC89Q8N998 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
CCDC89Q8N998 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.65■□□□□ 0.58
CCDC89Q8N998 DUTP2-201ENST00000519164 463 ntBASIC18.65■□□□□ 0.58
CCDC89Q8N998 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC89Q8N998 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC89Q8N998 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC89Q8N998 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC89Q8N998 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC89Q8N998 TMEM191A-211ENST00000637163 1067 ntBASIC18.65■□□□□ 0.58
CCDC89Q8N998 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CCDC89Q8N998 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC89Q8N998 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC89Q8N998 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CCDC89Q8N998 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC89Q8N998 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC89Q8N998 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC89Q8N998 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC89Q8N998 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC89Q8N998 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC89Q8N998 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.58
CCDC89Q8N998 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC89Q8N998 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
CCDC89Q8N998 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.64■□□□□ 0.58
CCDC89Q8N998 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC89Q8N998 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC89Q8N998 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC89Q8N998 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC89Q8N998 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC89Q8N998 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC89Q8N998 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC89Q8N998 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.64■□□□□ 0.57
CCDC89Q8N998 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CCDC89Q8N998 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CCDC89Q8N998 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CCDC89Q8N998 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC89Q8N998 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.64■□□□□ 0.57
CCDC89Q8N998 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC89Q8N998 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.64■□□□□ 0.57
CCDC89Q8N998 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC89Q8N998 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC89Q8N998 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC89Q8N998 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC89Q8N998 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC89Q8N998 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC89Q8N998 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC89Q8N998 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC89Q8N998 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
CCDC89Q8N998 AC141586.5-201ENST00000624546 2050 ntBASIC18.64■□□□□ 0.57
CCDC89Q8N998 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC89Q8N998 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CCDC89Q8N998 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CCDC89Q8N998 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms