Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
KRT78Q8N1N4 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
KRT78Q8N1N4 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KRT78Q8N1N4 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KRT78Q8N1N4 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.37■□□□□ 0.37
KRT78Q8N1N4 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
KRT78Q8N1N4 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
KRT78Q8N1N4 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KRT78Q8N1N4 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
KRT78Q8N1N4 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KRT78Q8N1N4 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KRT78Q8N1N4 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KRT78Q8N1N4 MIR662-201ENST00000384847 95 ntBASIC17.37■□□□□ 0.37
KRT78Q8N1N4 AP003733.1-201ENST00000491725 852 ntBASIC17.37■□□□□ 0.37
KRT78Q8N1N4 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.37■□□□□ 0.37
KRT78Q8N1N4 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.37■□□□□ 0.37
KRT78Q8N1N4 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.37■□□□□ 0.37
KRT78Q8N1N4 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.37■□□□□ 0.37
KRT78Q8N1N4 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
KRT78Q8N1N4 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KRT78Q8N1N4 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
KRT78Q8N1N4 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KRT78Q8N1N4 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
KRT78Q8N1N4 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KRT78Q8N1N4 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
KRT78Q8N1N4 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.37■□□□□ 0.37
KRT78Q8N1N4 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
KRT78Q8N1N4 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
KRT78Q8N1N4 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KRT78Q8N1N4 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.37■□□□□ 0.37
KRT78Q8N1N4 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
KRT78Q8N1N4 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
KRT78Q8N1N4 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KRT78Q8N1N4 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
KRT78Q8N1N4 LINC00167-201ENST00000530583 1419 ntBASIC17.37■□□□□ 0.37
KRT78Q8N1N4 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KRT78Q8N1N4 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
KRT78Q8N1N4 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.37■□□□□ 0.37
KRT78Q8N1N4 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
KRT78Q8N1N4 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
KRT78Q8N1N4 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
KRT78Q8N1N4 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KRT78Q8N1N4 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
KRT78Q8N1N4 AC132938.6-201ENST00000623828 1655 ntBASIC17.36■□□□□ 0.37
KRT78Q8N1N4 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.36■□□□□ 0.37
KRT78Q8N1N4 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
KRT78Q8N1N4 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
KRT78Q8N1N4 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.36■□□□□ 0.37
KRT78Q8N1N4 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
KRT78Q8N1N4 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
KRT78Q8N1N4 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
KRT78Q8N1N4 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.36■□□□□ 0.37
KRT78Q8N1N4 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
KRT78Q8N1N4 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
KRT78Q8N1N4 AL671277.2-201ENST00000458060 996 ntBASIC17.36■□□□□ 0.37
KRT78Q8N1N4 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.36■□□□□ 0.37
KRT78Q8N1N4 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
KRT78Q8N1N4 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.36■□□□□ 0.37
KRT78Q8N1N4 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
KRT78Q8N1N4 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.36■□□□□ 0.37
KRT78Q8N1N4 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.36■□□□□ 0.37
KRT78Q8N1N4 HYMAI.1-201ENST00000620949 238 ntBASIC17.36■□□□□ 0.37
KRT78Q8N1N4 NOC2LP2-201ENST00000407594 1944 ntBASIC17.36■□□□□ 0.37
KRT78Q8N1N4 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KRT78Q8N1N4 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KRT78Q8N1N4 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KRT78Q8N1N4 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KRT78Q8N1N4 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KRT78Q8N1N4 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
KRT78Q8N1N4 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KRT78Q8N1N4 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
KRT78Q8N1N4 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
KRT78Q8N1N4 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.36■□□□□ 0.37
KRT78Q8N1N4 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
KRT78Q8N1N4 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KRT78Q8N1N4 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
KRT78Q8N1N4 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.36■□□□□ 0.37
KRT78Q8N1N4 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
KRT78Q8N1N4 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KRT78Q8N1N4 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
KRT78Q8N1N4 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.35■□□□□ 0.37
KRT78Q8N1N4 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
KRT78Q8N1N4 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
KRT78Q8N1N4 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
KRT78Q8N1N4 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KRT78Q8N1N4 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KRT78Q8N1N4 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
KRT78Q8N1N4 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.35■□□□□ 0.37
KRT78Q8N1N4 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
KRT78Q8N1N4 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.35■□□□□ 0.37
KRT78Q8N1N4 FAM210CP-201ENST00000445714 574 ntBASIC17.35■□□□□ 0.37
KRT78Q8N1N4 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.35■□□□□ 0.37
KRT78Q8N1N4 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
KRT78Q8N1N4 AL049597.2-201ENST00000565575 961 ntBASIC17.35■□□□□ 0.37
KRT78Q8N1N4 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.35■□□□□ 0.37
KRT78Q8N1N4 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.35■□□□□ 0.37
KRT78Q8N1N4 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.35■□□□□ 0.37
KRT78Q8N1N4 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.35■□□□□ 0.37
KRT78Q8N1N4 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.35■□□□□ 0.37
KRT78Q8N1N4 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms