Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE9Q8IYJ1 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE9Q8IYJ1 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CPNE9Q8IYJ1 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.8■□□□□ 0.44
CPNE9Q8IYJ1 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE9Q8IYJ1 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
CPNE9Q8IYJ1 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE9Q8IYJ1 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE9Q8IYJ1 AK4P3-201ENST00000418260 669 ntBASIC17.8■□□□□ 0.44
CPNE9Q8IYJ1 TSPY5P-201ENST00000426936 936 ntBASIC17.8■□□□□ 0.44
CPNE9Q8IYJ1 KRT18P38-201ENST00000449496 1282 ntBASIC17.8■□□□□ 0.44
CPNE9Q8IYJ1 AC092597.1-201ENST00000487352 616 ntBASIC17.8■□□□□ 0.44
CPNE9Q8IYJ1 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
CPNE9Q8IYJ1 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.8■□□□□ 0.44
CPNE9Q8IYJ1 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE9Q8IYJ1 AC024563.2-201ENST00000603282 481 ntBASIC17.8■□□□□ 0.44
CPNE9Q8IYJ1 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE9Q8IYJ1 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.8■□□□□ 0.44
CPNE9Q8IYJ1 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CPNE9Q8IYJ1 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE9Q8IYJ1 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.8■□□□□ 0.44
CPNE9Q8IYJ1 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE9Q8IYJ1 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CPNE9Q8IYJ1 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE9Q8IYJ1 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE9Q8IYJ1 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.8■□□□□ 0.44
CPNE9Q8IYJ1 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE9Q8IYJ1 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CPNE9Q8IYJ1 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE9Q8IYJ1 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE9Q8IYJ1 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.79■□□□□ 0.44
CPNE9Q8IYJ1 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE9Q8IYJ1 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
CPNE9Q8IYJ1 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE9Q8IYJ1 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE9Q8IYJ1 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE9Q8IYJ1 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE9Q8IYJ1 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE9Q8IYJ1 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE9Q8IYJ1 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.79■□□□□ 0.44
CPNE9Q8IYJ1 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE9Q8IYJ1 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.79■□□□□ 0.44
CPNE9Q8IYJ1 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.79■□□□□ 0.44
CPNE9Q8IYJ1 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.79■□□□□ 0.44
CPNE9Q8IYJ1 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE9Q8IYJ1 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE9Q8IYJ1 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CPNE9Q8IYJ1 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE9Q8IYJ1 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE9Q8IYJ1 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
CPNE9Q8IYJ1 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE9Q8IYJ1 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE9Q8IYJ1 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.79■□□□□ 0.44
CPNE9Q8IYJ1 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CPNE9Q8IYJ1 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
CPNE9Q8IYJ1 RNF152P1-201ENST00000397754 604 ntBASIC17.79■□□□□ 0.44
CPNE9Q8IYJ1 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.79■□□□□ 0.44
CPNE9Q8IYJ1 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.79■□□□□ 0.44
CPNE9Q8IYJ1 AL359075.1-203ENST00000462729 1002 ntBASIC17.79■□□□□ 0.44
CPNE9Q8IYJ1 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE9Q8IYJ1 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.79■□□□□ 0.44
CPNE9Q8IYJ1 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.79■□□□□ 0.44
CPNE9Q8IYJ1 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE9Q8IYJ1 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
CPNE9Q8IYJ1 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE9Q8IYJ1 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CPNE9Q8IYJ1 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE9Q8IYJ1 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE9Q8IYJ1 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE9Q8IYJ1 AC012317.2-201ENST00000623305 2251 ntBASIC17.79■□□□□ 0.44
CPNE9Q8IYJ1 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CPNE9Q8IYJ1 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE9Q8IYJ1 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE9Q8IYJ1 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE9Q8IYJ1 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE9Q8IYJ1 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE9Q8IYJ1 AC009053.2-201ENST00000563701 2365 ntBASIC17.79■□□□□ 0.44
CPNE9Q8IYJ1 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE9Q8IYJ1 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE9Q8IYJ1 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.79■□□□□ 0.44
CPNE9Q8IYJ1 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE9Q8IYJ1 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE9Q8IYJ1 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE9Q8IYJ1 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CPNE9Q8IYJ1 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CPNE9Q8IYJ1 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPNE9Q8IYJ1 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CPNE9Q8IYJ1 GNAS-203ENST00000306120 1878 ntBASIC17.78■□□□□ 0.44
CPNE9Q8IYJ1 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CPNE9Q8IYJ1 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.78■□□□□ 0.44
CPNE9Q8IYJ1 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CPNE9Q8IYJ1 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CPNE9Q8IYJ1 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPNE9Q8IYJ1 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPNE9Q8IYJ1 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPNE9Q8IYJ1 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPNE9Q8IYJ1 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.78■□□□□ 0.44
CPNE9Q8IYJ1 AC104076.2-201ENST00000448912 469 ntBASIC17.78■□□□□ 0.44
CPNE9Q8IYJ1 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPNE9Q8IYJ1 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms