Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.92■□□□□ 0.62
SCN4BQ8IWT1 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.92■□□□□ 0.62
SCN4BQ8IWT1 AC009533.2-201ENST00000543664 586 ntBASIC18.92■□□□□ 0.62
SCN4BQ8IWT1 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SCN4BQ8IWT1 AL138831.2-201ENST00000606564 490 ntBASIC18.92■□□□□ 0.62
SCN4BQ8IWT1 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.92■□□□□ 0.62
SCN4BQ8IWT1 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.92■□□□□ 0.62
SCN4BQ8IWT1 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SCN4BQ8IWT1 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SCN4BQ8IWT1 AC093677.2-201ENST00000600169 1863 ntBASIC18.92■□□□□ 0.62
SCN4BQ8IWT1 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SCN4BQ8IWT1 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SCN4BQ8IWT1 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.92■□□□□ 0.62
SCN4BQ8IWT1 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SCN4BQ8IWT1 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.91■□□□□ 0.62
SCN4BQ8IWT1 AC125634.1-201ENST00000438758 1403 ntBASIC18.91■□□□□ 0.62
SCN4BQ8IWT1 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
SCN4BQ8IWT1 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
SCN4BQ8IWT1 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCN4BQ8IWT1 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCN4BQ8IWT1 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCN4BQ8IWT1 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCN4BQ8IWT1 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCN4BQ8IWT1 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCN4BQ8IWT1 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SCN4BQ8IWT1 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCN4BQ8IWT1 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCN4BQ8IWT1 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SCN4BQ8IWT1 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCN4BQ8IWT1 AC079781.3-201ENST00000449110 356 ntBASIC18.91■□□□□ 0.62
SCN4BQ8IWT1 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.91■□□□□ 0.62
SCN4BQ8IWT1 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
SCN4BQ8IWT1 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
SCN4BQ8IWT1 AL031008.1-201ENST00000619963 541 ntBASIC18.91■□□□□ 0.62
SCN4BQ8IWT1 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
SCN4BQ8IWT1 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
SCN4BQ8IWT1 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SCN4BQ8IWT1 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCN4BQ8IWT1 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCN4BQ8IWT1 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.91■□□□□ 0.62
SCN4BQ8IWT1 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SCN4BQ8IWT1 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SCN4BQ8IWT1 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCN4BQ8IWT1 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.91■□□□□ 0.62
SCN4BQ8IWT1 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCN4BQ8IWT1 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SCN4BQ8IWT1 AC090164.3-201ENST00000610780 2143 ntBASIC18.91■□□□□ 0.62
SCN4BQ8IWT1 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
SCN4BQ8IWT1 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCN4BQ8IWT1 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCN4BQ8IWT1 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCN4BQ8IWT1 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCN4BQ8IWT1 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SCN4BQ8IWT1 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCN4BQ8IWT1 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.9■□□□□ 0.62
SCN4BQ8IWT1 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.9■□□□□ 0.62
SCN4BQ8IWT1 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCN4BQ8IWT1 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SCN4BQ8IWT1 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCN4BQ8IWT1 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.9■□□□□ 0.62
SCN4BQ8IWT1 AKR1C7P-201ENST00000305623 895 ntBASIC18.9■□□□□ 0.62
SCN4BQ8IWT1 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.9■□□□□ 0.62
SCN4BQ8IWT1 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
SCN4BQ8IWT1 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.9■□□□□ 0.62
SCN4BQ8IWT1 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SCN4BQ8IWT1 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.9■□□□□ 0.62
SCN4BQ8IWT1 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
SCN4BQ8IWT1 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.9■□□□□ 0.62
SCN4BQ8IWT1 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
SCN4BQ8IWT1 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.9■□□□□ 0.62
SCN4BQ8IWT1 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCN4BQ8IWT1 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SCN4BQ8IWT1 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCN4BQ8IWT1 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.9■□□□□ 0.62
SCN4BQ8IWT1 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.9■□□□□ 0.62
SCN4BQ8IWT1 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCN4BQ8IWT1 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SCN4BQ8IWT1 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCN4BQ8IWT1 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SCN4BQ8IWT1 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
SCN4BQ8IWT1 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
SCN4BQ8IWT1 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SCN4BQ8IWT1 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.89■□□□□ 0.62
SCN4BQ8IWT1 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
SCN4BQ8IWT1 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
SCN4BQ8IWT1 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SCN4BQ8IWT1 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.89■□□□□ 0.61
SCN4BQ8IWT1 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.89■□□□□ 0.61
SCN4BQ8IWT1 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCN4BQ8IWT1 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.89■□□□□ 0.61
SCN4BQ8IWT1 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCN4BQ8IWT1 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
SCN4BQ8IWT1 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.89■□□□□ 0.61
SCN4BQ8IWT1 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCN4BQ8IWT1 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
SCN4BQ8IWT1 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.89■□□□□ 0.61
SCN4BQ8IWT1 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.89■□□□□ 0.61
SCN4BQ8IWT1 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.89■□□□□ 0.61
SCN4BQ8IWT1 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SCN4BQ8IWT1 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms