Protein–RNA interactions for Protein: Q8IWA5

SLC44A2, Choline transporter-like protein 2, humanhuman

Predicted RBP Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A2Q8IWA5 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC44A2Q8IWA5 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC44A2Q8IWA5 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC44A2Q8IWA5 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC44A2Q8IWA5 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC44A2Q8IWA5 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.13■□□□□ 0.33
SLC44A2Q8IWA5 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLC44A2Q8IWA5 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.13■□□□□ 0.33
SLC44A2Q8IWA5 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC44A2Q8IWA5 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
SLC44A2Q8IWA5 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SLC44A2Q8IWA5 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.13■□□□□ 0.33
SLC44A2Q8IWA5 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLC44A2Q8IWA5 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SLC44A2Q8IWA5 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC44A2Q8IWA5 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC44A2Q8IWA5 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SLC44A2Q8IWA5 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.13■□□□□ 0.33
SLC44A2Q8IWA5 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC44A2Q8IWA5 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SLC44A2Q8IWA5 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC44A2Q8IWA5 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.13■□□□□ 0.33
SLC44A2Q8IWA5 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC44A2Q8IWA5 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.13■□□□□ 0.33
SLC44A2Q8IWA5 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.13■□□□□ 0.33
SLC44A2Q8IWA5 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLC44A2Q8IWA5 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC44A2Q8IWA5 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
SLC44A2Q8IWA5 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC44A2Q8IWA5 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC44A2Q8IWA5 AL163051.1-201ENST00000569214 1512 ntBASIC17.12■□□□□ 0.33
SLC44A2Q8IWA5 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.12■□□□□ 0.33
SLC44A2Q8IWA5 AC134043.2-201ENST00000624206 2238 ntBASIC17.12■□□□□ 0.33
SLC44A2Q8IWA5 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC44A2Q8IWA5 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SLC44A2Q8IWA5 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SLC44A2Q8IWA5 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SLC44A2Q8IWA5 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SLC44A2Q8IWA5 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC44A2Q8IWA5 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC44A2Q8IWA5 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.12■□□□□ 0.33
SLC44A2Q8IWA5 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SLC44A2Q8IWA5 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC44A2Q8IWA5 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.12■□□□□ 0.33
SLC44A2Q8IWA5 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC44A2Q8IWA5 AC104390.1-201ENST00000555663 520 ntBASIC17.12■□□□□ 0.33
SLC44A2Q8IWA5 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.12■□□□□ 0.33
SLC44A2Q8IWA5 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC44A2Q8IWA5 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC44A2Q8IWA5 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC44A2Q8IWA5 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC44A2Q8IWA5 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC44A2Q8IWA5 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC44A2Q8IWA5 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
SLC44A2Q8IWA5 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
SLC44A2Q8IWA5 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC44A2Q8IWA5 PHGDH-209ENST00000641074 1780 ntBASIC17.12■□□□□ 0.33
SLC44A2Q8IWA5 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SLC44A2Q8IWA5 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC44A2Q8IWA5 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC44A2Q8IWA5 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC44A2Q8IWA5 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.12■□□□□ 0.33
SLC44A2Q8IWA5 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC44A2Q8IWA5 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC44A2Q8IWA5 AC009102.3-201ENST00000623118 1491 ntBASIC17.12■□□□□ 0.33
SLC44A2Q8IWA5 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SLC44A2Q8IWA5 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC44A2Q8IWA5 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC44A2Q8IWA5 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
SLC44A2Q8IWA5 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC44A2Q8IWA5 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC44A2Q8IWA5 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.11■□□□□ 0.33
SLC44A2Q8IWA5 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC44A2Q8IWA5 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC44A2Q8IWA5 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC44A2Q8IWA5 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC44A2Q8IWA5 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC44A2Q8IWA5 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC44A2Q8IWA5 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC44A2Q8IWA5 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC44A2Q8IWA5 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC44A2Q8IWA5 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC44A2Q8IWA5 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC44A2Q8IWA5 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.11■□□□□ 0.33
SLC44A2Q8IWA5 KRT18P57-201ENST00000443599 1254 ntBASIC17.11■□□□□ 0.33
SLC44A2Q8IWA5 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.11■□□□□ 0.33
SLC44A2Q8IWA5 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SLC44A2Q8IWA5 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.11■□□□□ 0.33
SLC44A2Q8IWA5 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC44A2Q8IWA5 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC44A2Q8IWA5 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC44A2Q8IWA5 AC140113.3-201ENST00000605663 199 ntBASIC17.11■□□□□ 0.33
SLC44A2Q8IWA5 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC44A2Q8IWA5 AL023973.1-201ENST00000624619 620 ntBASIC17.11■□□□□ 0.33
SLC44A2Q8IWA5 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SLC44A2Q8IWA5 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC44A2Q8IWA5 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC44A2Q8IWA5 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC44A2Q8IWA5 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC44A2Q8IWA5 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms