Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.18■□□□□ 0.34
RAB43Q86YS6 AC091304.2-201ENST00000564639 760 ntBASIC17.18■□□□□ 0.34
RAB43Q86YS6 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.18■□□□□ 0.34
RAB43Q86YS6 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.18■□□□□ 0.34
RAB43Q86YS6 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RAB43Q86YS6 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB43Q86YS6 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
RAB43Q86YS6 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RAB43Q86YS6 AL357033.4-201ENST00000617703 1807 ntBASIC17.18■□□□□ 0.34
RAB43Q86YS6 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB43Q86YS6 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RAB43Q86YS6 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.18■□□□□ 0.34
RAB43Q86YS6 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
RAB43Q86YS6 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RAB43Q86YS6 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
RAB43Q86YS6 PRORSD1P-202ENST00000563365 2154 ntBASIC17.18■□□□□ 0.34
RAB43Q86YS6 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB43Q86YS6 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB43Q86YS6 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RAB43Q86YS6 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB43Q86YS6 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RAB43Q86YS6 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB43Q86YS6 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RAB43Q86YS6 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.17■□□□□ 0.34
RAB43Q86YS6 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RAB43Q86YS6 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
RAB43Q86YS6 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB43Q86YS6 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB43Q86YS6 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB43Q86YS6 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.17■□□□□ 0.34
RAB43Q86YS6 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB43Q86YS6 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
RAB43Q86YS6 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RAB43Q86YS6 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB43Q86YS6 AL845331.1-201ENST00000424978 1190 ntBASIC17.17■□□□□ 0.34
RAB43Q86YS6 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.17■□□□□ 0.34
RAB43Q86YS6 KRT18P41-201ENST00000518924 1277 ntBASIC17.17■□□□□ 0.34
RAB43Q86YS6 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.17■□□□□ 0.34
RAB43Q86YS6 KRT8P50-201ENST00000562022 1438 ntBASIC17.17■□□□□ 0.34
RAB43Q86YS6 AC074051.2-201ENST00000565115 352 ntBASIC17.17■□□□□ 0.34
RAB43Q86YS6 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.17■□□□□ 0.34
RAB43Q86YS6 AC008687.5-201ENST00000593746 558 ntBASIC17.17■□□□□ 0.34
RAB43Q86YS6 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
RAB43Q86YS6 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB43Q86YS6 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RAB43Q86YS6 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB43Q86YS6 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
RAB43Q86YS6 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.17■□□□□ 0.34
RAB43Q86YS6 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RAB43Q86YS6 AC139713.2-201ENST00000641328 2723 ntBASIC17.17■□□□□ 0.34
RAB43Q86YS6 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RAB43Q86YS6 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB43Q86YS6 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.17■□□□□ 0.34
RAB43Q86YS6 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB43Q86YS6 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB43Q86YS6 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB43Q86YS6 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
RAB43Q86YS6 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB43Q86YS6 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RAB43Q86YS6 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RAB43Q86YS6 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
RAB43Q86YS6 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RAB43Q86YS6 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
RAB43Q86YS6 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RAB43Q86YS6 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB43Q86YS6 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
RAB43Q86YS6 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RAB43Q86YS6 TSPY19P-201ENST00000418461 509 ntBASIC17.16■□□□□ 0.34
RAB43Q86YS6 TSPY18P-201ENST00000441642 509 ntBASIC17.16■□□□□ 0.34
RAB43Q86YS6 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.16■□□□□ 0.34
RAB43Q86YS6 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.16■□□□□ 0.34
RAB43Q86YS6 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.16■□□□□ 0.34
RAB43Q86YS6 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.16■□□□□ 0.34
RAB43Q86YS6 AL592071.1-201ENST00000611956 408 ntBASIC17.16■□□□□ 0.34
RAB43Q86YS6 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB43Q86YS6 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB43Q86YS6 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
RAB43Q86YS6 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.16■□□□□ 0.34
RAB43Q86YS6 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RAB43Q86YS6 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.16■□□□□ 0.34
RAB43Q86YS6 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.16■□□□□ 0.34
RAB43Q86YS6 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB43Q86YS6 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
RAB43Q86YS6 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.16■□□□□ 0.34
RAB43Q86YS6 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.15■□□□□ 0.34
RAB43Q86YS6 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAB43Q86YS6 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RAB43Q86YS6 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB43Q86YS6 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
RAB43Q86YS6 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB43Q86YS6 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB43Q86YS6 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RAB43Q86YS6 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB43Q86YS6 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAB43Q86YS6 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.15■□□□□ 0.34
RAB43Q86YS6 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.15■□□□□ 0.34
RAB43Q86YS6 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB43Q86YS6 FOSL1P1-201ENST00000511041 816 ntBASIC17.15■□□□□ 0.34
RAB43Q86YS6 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAB43Q86YS6 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms