Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM50Q86XT4 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM50Q86XT4 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20■□□□□ 0.79
TRIM50Q86XT4 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20■□□□□ 0.79
TRIM50Q86XT4 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM50Q86XT4 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM50Q86XT4 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
TRIM50Q86XT4 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRIM50Q86XT4 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
TRIM50Q86XT4 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM50Q86XT4 AC087289.5-201ENST00000586076 3175 ntBASIC19.99■□□□□ 0.79
TRIM50Q86XT4 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
TRIM50Q86XT4 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM50Q86XT4 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM50Q86XT4 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
TRIM50Q86XT4 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM50Q86XT4 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.99■□□□□ 0.79
TRIM50Q86XT4 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
TRIM50Q86XT4 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM50Q86XT4 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
TRIM50Q86XT4 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM50Q86XT4 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.99■□□□□ 0.79
TRIM50Q86XT4 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.99■□□□□ 0.79
TRIM50Q86XT4 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.99■□□□□ 0.79
TRIM50Q86XT4 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM50Q86XT4 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
TRIM50Q86XT4 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.99■□□□□ 0.79
TRIM50Q86XT4 RBM17P3-201ENST00000417687 1192 ntBASIC19.99■□□□□ 0.79
TRIM50Q86XT4 AC064862.7-201ENST00000604520 867 ntBASIC19.99■□□□□ 0.79
TRIM50Q86XT4 BX640515.1-201ENST00000617215 977 ntBASIC19.99■□□□□ 0.79
TRIM50Q86XT4 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.99■□□□□ 0.79
TRIM50Q86XT4 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM50Q86XT4 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM50Q86XT4 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.99■□□□□ 0.79
TRIM50Q86XT4 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM50Q86XT4 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM50Q86XT4 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM50Q86XT4 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.98■□□□□ 0.79
TRIM50Q86XT4 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM50Q86XT4 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.98■□□□□ 0.79
TRIM50Q86XT4 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.98■□□□□ 0.79
TRIM50Q86XT4 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
TRIM50Q86XT4 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
TRIM50Q86XT4 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM50Q86XT4 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM50Q86XT4 AC243591.1-201ENST00000452967 1364 ntBASIC19.98■□□□□ 0.79
TRIM50Q86XT4 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM50Q86XT4 PAN3-AS1-201ENST00000563843 1351 ntBASIC19.98■□□□□ 0.79
TRIM50Q86XT4 KRT8P47-201ENST00000604727 1398 ntBASIC19.98■□□□□ 0.79
TRIM50Q86XT4 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM50Q86XT4 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
TRIM50Q86XT4 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM50Q86XT4 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM50Q86XT4 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM50Q86XT4 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
TRIM50Q86XT4 HNRNPDP1-201ENST00000439535 754 ntBASIC19.98■□□□□ 0.79
TRIM50Q86XT4 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19.98■□□□□ 0.79
TRIM50Q86XT4 RNPS1P1-201ENST00000507437 918 ntBASIC19.98■□□□□ 0.79
TRIM50Q86XT4 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.98■□□□□ 0.79
TRIM50Q86XT4 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.98■□□□□ 0.79
TRIM50Q86XT4 AL671883.3-201ENST00000603274 991 ntBASIC19.98■□□□□ 0.79
TRIM50Q86XT4 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19.98■□□□□ 0.79
TRIM50Q86XT4 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.98■□□□□ 0.79
TRIM50Q86XT4 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM50Q86XT4 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.98■□□□□ 0.79
TRIM50Q86XT4 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM50Q86XT4 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
TRIM50Q86XT4 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM50Q86XT4 IL9RP2-201ENST00000423948 1312 ntBASIC19.98■□□□□ 0.79
TRIM50Q86XT4 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.98■□□□□ 0.79
TRIM50Q86XT4 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.98■□□□□ 0.79
TRIM50Q86XT4 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM50Q86XT4 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC19.98■□□□□ 0.79
TRIM50Q86XT4 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM50Q86XT4 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM50Q86XT4 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM50Q86XT4 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM50Q86XT4 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM50Q86XT4 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM50Q86XT4 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM50Q86XT4 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM50Q86XT4 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM50Q86XT4 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM50Q86XT4 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM50Q86XT4 AP005117.1-201ENST00000584346 1413 ntBASIC19.97■□□□□ 0.79
TRIM50Q86XT4 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC19.97■□□□□ 0.79
TRIM50Q86XT4 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.97■□□□□ 0.79
TRIM50Q86XT4 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.97■□□□□ 0.79
TRIM50Q86XT4 SART3-203ENST00000546611 1184 ntBASIC19.97■□□□□ 0.79
TRIM50Q86XT4 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.97■□□□□ 0.79
TRIM50Q86XT4 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.97■□□□□ 0.79
TRIM50Q86XT4 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
TRIM50Q86XT4 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM50Q86XT4 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.97■□□□□ 0.79
TRIM50Q86XT4 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM50Q86XT4 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM50Q86XT4 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM50Q86XT4 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM50Q86XT4 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM50Q86XT4 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms