Protein–RNA interactions for Protein: Q7Z3J3

RGPD4, RanBP2-like and GRIP domain-containing protein 4, humanhuman

Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4Q7Z3J3 BAD-207ENST00000544785 525 ntTSL 3 BASIC22.58■■□□□ 1.2
RGPD4Q7Z3J3 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
RGPD4Q7Z3J3 AC026120.1-201ENST00000611536 926 ntBASIC22.58■■□□□ 1.2
RGPD4Q7Z3J3 AC025048.6-201ENST00000634326 1161 ntBASIC22.58■■□□□ 1.2
RGPD4Q7Z3J3 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RGPD4Q7Z3J3 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RGPD4Q7Z3J3 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC22.57■■□□□ 1.2
RGPD4Q7Z3J3 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC22.57■■□□□ 1.2
RGPD4Q7Z3J3 RN7SL589P-201ENST00000481268 310 ntBASIC22.57■■□□□ 1.2
RGPD4Q7Z3J3 INGX-202ENST00000489074 768 ntBASIC22.57■■□□□ 1.2
RGPD4Q7Z3J3 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RGPD4Q7Z3J3 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RGPD4Q7Z3J3 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC22.57■■□□□ 1.2
RGPD4Q7Z3J3 AL390754.1-201ENST00000619088 582 ntBASIC22.57■■□□□ 1.2
RGPD4Q7Z3J3 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RGPD4Q7Z3J3 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RGPD4Q7Z3J3 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
RGPD4Q7Z3J3 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
RGPD4Q7Z3J3 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RGPD4Q7Z3J3 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC22.57■■□□□ 1.2
RGPD4Q7Z3J3 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RGPD4Q7Z3J3 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RGPD4Q7Z3J3 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RGPD4Q7Z3J3 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC22.56■■□□□ 1.2
RGPD4Q7Z3J3 AC125807.1-201ENST00000483097 614 ntBASIC22.56■■□□□ 1.2
RGPD4Q7Z3J3 SLC25A39P2-201ENST00000537614 270 ntBASIC22.56■■□□□ 1.2
RGPD4Q7Z3J3 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC22.56■■□□□ 1.2
RGPD4Q7Z3J3 AL358472.5-202ENST00000641448 1267 ntBASIC22.56■■□□□ 1.2
RGPD4Q7Z3J3 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC22.56■■□□□ 1.2
RGPD4Q7Z3J3 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
RGPD4Q7Z3J3 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
RGPD4Q7Z3J3 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC22.56■■□□□ 1.2
RGPD4Q7Z3J3 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RGPD4Q7Z3J3 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC22.56■■□□□ 1.2
RGPD4Q7Z3J3 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RGPD4Q7Z3J3 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RGPD4Q7Z3J3 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC22.56■■□□□ 1.2
RGPD4Q7Z3J3 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RGPD4Q7Z3J3 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RGPD4Q7Z3J3 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
RGPD4Q7Z3J3 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RGPD4Q7Z3J3 HNRNPA1P40-201ENST00000426371 1278 ntBASIC22.55■■□□□ 1.2
RGPD4Q7Z3J3 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC22.55■■□□□ 1.2
RGPD4Q7Z3J3 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC22.55■■□□□ 1.2
RGPD4Q7Z3J3 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
RGPD4Q7Z3J3 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RGPD4Q7Z3J3 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC22.55■■□□□ 1.2
RGPD4Q7Z3J3 AL606495.2-201ENST00000605867 535 ntBASIC22.55■■□□□ 1.2
RGPD4Q7Z3J3 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RGPD4Q7Z3J3 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RGPD4Q7Z3J3 SIRPAP1-201ENST00000448467 1770 ntBASIC22.55■■□□□ 1.2
RGPD4Q7Z3J3 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC22.55■■□□□ 1.2
RGPD4Q7Z3J3 AL049757.1-201ENST00000616842 1596 ntBASIC22.55■■□□□ 1.2
RGPD4Q7Z3J3 RN7SL692P-201ENST00000464677 288 ntBASIC22.55■■□□□ 1.2
RGPD4Q7Z3J3 GATB-205ENST00000508611 605 ntTSL 2 BASIC22.55■■□□□ 1.2
RGPD4Q7Z3J3 TSFM-210ENST00000550559 897 ntTSL 5 BASIC22.55■■□□□ 1.2
RGPD4Q7Z3J3 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC22.55■■□□□ 1.2
RGPD4Q7Z3J3 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RGPD4Q7Z3J3 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC22.55■■□□□ 1.2
RGPD4Q7Z3J3 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
RGPD4Q7Z3J3 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC22.55■■□□□ 1.2
RGPD4Q7Z3J3 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC22.54■■□□□ 1.2
RGPD4Q7Z3J3 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC22.54■■□□□ 1.2
RGPD4Q7Z3J3 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RGPD4Q7Z3J3 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
RGPD4Q7Z3J3 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC22.54■■□□□ 1.2
RGPD4Q7Z3J3 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC22.54■■□□□ 1.2
RGPD4Q7Z3J3 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC22.54■■□□□ 1.2
RGPD4Q7Z3J3 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC22.54■■□□□ 1.2
RGPD4Q7Z3J3 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
RGPD4Q7Z3J3 PTCHD3P3-201ENST00000403073 906 ntBASIC22.54■■□□□ 1.2
RGPD4Q7Z3J3 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC22.54■■□□□ 1.2
RGPD4Q7Z3J3 CR383656.12-201ENST00000549567 513 ntBASIC22.54■■□□□ 1.2
RGPD4Q7Z3J3 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC22.54■■□□□ 1.2
RGPD4Q7Z3J3 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC22.54■■□□□ 1.2
RGPD4Q7Z3J3 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC22.54■■□□□ 1.2
RGPD4Q7Z3J3 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RGPD4Q7Z3J3 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RGPD4Q7Z3J3 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC22.54■■□□□ 1.2
RGPD4Q7Z3J3 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RGPD4Q7Z3J3 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RGPD4Q7Z3J3 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
RGPD4Q7Z3J3 HNRNPFP1-201ENST00000391730 1133 ntBASIC22.53■■□□□ 1.2
RGPD4Q7Z3J3 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC22.53■■□□□ 1.2
RGPD4Q7Z3J3 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
RGPD4Q7Z3J3 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC22.53■■□□□ 1.2
RGPD4Q7Z3J3 AL359881.2-201ENST00000602973 570 ntBASIC22.53■■□□□ 1.2
RGPD4Q7Z3J3 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RGPD4Q7Z3J3 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC22.53■■□□□ 1.2
RGPD4Q7Z3J3 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RGPD4Q7Z3J3 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
RGPD4Q7Z3J3 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RGPD4Q7Z3J3 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RGPD4Q7Z3J3 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
RGPD4Q7Z3J3 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC22.53■■□□□ 1.2
RGPD4Q7Z3J3 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RGPD4Q7Z3J3 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
RGPD4Q7Z3J3 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RGPD4Q7Z3J3 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RGPD4Q7Z3J3 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms