Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC20.73■□□□□ 0.91
OTOP1Q7RTM1 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
OTOP1Q7RTM1 AC099343.3-201ENST00000605834 2503 ntBASIC20.73■□□□□ 0.91
OTOP1Q7RTM1 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
OTOP1Q7RTM1 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
OTOP1Q7RTM1 SDHAP2-201ENST00000455183 2001 ntBASIC20.73■□□□□ 0.91
OTOP1Q7RTM1 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
OTOP1Q7RTM1 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
OTOP1Q7RTM1 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
OTOP1Q7RTM1 AC005082.1-201ENST00000413042 2259 ntBASIC20.73■□□□□ 0.91
OTOP1Q7RTM1 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.72■□□□□ 0.91
OTOP1Q7RTM1 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
OTOP1Q7RTM1 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.72■□□□□ 0.91
OTOP1Q7RTM1 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.72■□□□□ 0.91
OTOP1Q7RTM1 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
OTOP1Q7RTM1 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.72■□□□□ 0.91
OTOP1Q7RTM1 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.72■□□□□ 0.91
OTOP1Q7RTM1 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
OTOP1Q7RTM1 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
OTOP1Q7RTM1 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
OTOP1Q7RTM1 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
OTOP1Q7RTM1 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
OTOP1Q7RTM1 MIR149-201ENST00000384879 89 ntBASIC20.72■□□□□ 0.91
OTOP1Q7RTM1 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC20.72■□□□□ 0.91
OTOP1Q7RTM1 CNN2P11-201ENST00000429351 262 ntBASIC20.72■□□□□ 0.91
OTOP1Q7RTM1 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.72■□□□□ 0.91
OTOP1Q7RTM1 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC20.72■□□□□ 0.91
OTOP1Q7RTM1 SPCS2P1-201ENST00000561636 679 ntBASIC20.72■□□□□ 0.91
OTOP1Q7RTM1 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.72■□□□□ 0.91
OTOP1Q7RTM1 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
OTOP1Q7RTM1 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
OTOP1Q7RTM1 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
OTOP1Q7RTM1 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.72■□□□□ 0.91
OTOP1Q7RTM1 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
OTOP1Q7RTM1 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
OTOP1Q7RTM1 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
OTOP1Q7RTM1 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
OTOP1Q7RTM1 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.71■□□□□ 0.91
OTOP1Q7RTM1 AC125634.1-201ENST00000438758 1403 ntBASIC20.71■□□□□ 0.91
OTOP1Q7RTM1 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
OTOP1Q7RTM1 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.71■□□□□ 0.91
OTOP1Q7RTM1 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
OTOP1Q7RTM1 AC126763.1-201ENST00000552015 2118 ntBASIC20.71■□□□□ 0.91
OTOP1Q7RTM1 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
OTOP1Q7RTM1 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
OTOP1Q7RTM1 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
OTOP1Q7RTM1 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
OTOP1Q7RTM1 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
OTOP1Q7RTM1 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
OTOP1Q7RTM1 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
OTOP1Q7RTM1 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
OTOP1Q7RTM1 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
OTOP1Q7RTM1 LAGE3P1-201ENST00000425356 484 ntBASIC20.71■□□□□ 0.91
OTOP1Q7RTM1 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC20.71■□□□□ 0.91
OTOP1Q7RTM1 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC20.71■□□□□ 0.91
OTOP1Q7RTM1 KRT18P2-201ENST00000447938 1258 ntBASIC20.71■□□□□ 0.91
OTOP1Q7RTM1 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC20.71■□□□□ 0.91
OTOP1Q7RTM1 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC20.71■□□□□ 0.91
OTOP1Q7RTM1 RNF151-202ENST00000569210 853 ntTSL 2 BASIC20.71■□□□□ 0.91
OTOP1Q7RTM1 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC20.71■□□□□ 0.91
OTOP1Q7RTM1 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC20.71■□□□□ 0.91
OTOP1Q7RTM1 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
OTOP1Q7RTM1 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
OTOP1Q7RTM1 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
OTOP1Q7RTM1 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
OTOP1Q7RTM1 AC004408.2-201ENST00000623613 2777 ntBASIC20.71■□□□□ 0.91
OTOP1Q7RTM1 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
OTOP1Q7RTM1 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
OTOP1Q7RTM1 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
OTOP1Q7RTM1 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
OTOP1Q7RTM1 AC009102.3-201ENST00000623118 1491 ntBASIC20.7■□□□□ 0.9
OTOP1Q7RTM1 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.7■□□□□ 0.9
OTOP1Q7RTM1 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
OTOP1Q7RTM1 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
OTOP1Q7RTM1 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
OTOP1Q7RTM1 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
OTOP1Q7RTM1 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.7■□□□□ 0.9
OTOP1Q7RTM1 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.7■□□□□ 0.9
OTOP1Q7RTM1 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC20.7■□□□□ 0.9
OTOP1Q7RTM1 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.7■□□□□ 0.9
OTOP1Q7RTM1 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
OTOP1Q7RTM1 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
OTOP1Q7RTM1 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
OTOP1Q7RTM1 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC20.7■□□□□ 0.9
OTOP1Q7RTM1 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC20.7■□□□□ 0.9
OTOP1Q7RTM1 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
OTOP1Q7RTM1 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.7■□□□□ 0.9
OTOP1Q7RTM1 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
OTOP1Q7RTM1 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
OTOP1Q7RTM1 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC20.7■□□□□ 0.9
OTOP1Q7RTM1 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
OTOP1Q7RTM1 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
OTOP1Q7RTM1 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
OTOP1Q7RTM1 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
OTOP1Q7RTM1 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
OTOP1Q7RTM1 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC20.69■□□□□ 0.9
OTOP1Q7RTM1 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
OTOP1Q7RTM1 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.69■□□□□ 0.9
OTOP1Q7RTM1 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
OTOP1Q7RTM1 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms