Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.57■□□□□ 0.4
LYSMD4Q5XG99 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
LYSMD4Q5XG99 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
LYSMD4Q5XG99 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LYSMD4Q5XG99 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
LYSMD4Q5XG99 CRYGEP-201ENST00000412192 528 ntBASIC17.57■□□□□ 0.4
LYSMD4Q5XG99 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.57■□□□□ 0.4
LYSMD4Q5XG99 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.57■□□□□ 0.4
LYSMD4Q5XG99 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
LYSMD4Q5XG99 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.57■□□□□ 0.4
LYSMD4Q5XG99 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.57■□□□□ 0.4
LYSMD4Q5XG99 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.57■□□□□ 0.4
LYSMD4Q5XG99 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LYSMD4Q5XG99 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.57■□□□□ 0.4
LYSMD4Q5XG99 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
LYSMD4Q5XG99 MIR4751-201ENST00000578027 74 ntBASIC17.57■□□□□ 0.4
LYSMD4Q5XG99 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LYSMD4Q5XG99 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.57■□□□□ 0.4
LYSMD4Q5XG99 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.57■□□□□ 0.4
LYSMD4Q5XG99 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
LYSMD4Q5XG99 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
LYSMD4Q5XG99 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LYSMD4Q5XG99 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LYSMD4Q5XG99 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LYSMD4Q5XG99 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
LYSMD4Q5XG99 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LYSMD4Q5XG99 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LYSMD4Q5XG99 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LYSMD4Q5XG99 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LYSMD4Q5XG99 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LYSMD4Q5XG99 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LYSMD4Q5XG99 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LYSMD4Q5XG99 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LYSMD4Q5XG99 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LYSMD4Q5XG99 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LYSMD4Q5XG99 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.56■□□□□ 0.4
LYSMD4Q5XG99 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.56■□□□□ 0.4
LYSMD4Q5XG99 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
LYSMD4Q5XG99 MIR4469-201ENST00000583919 79 ntBASIC17.56■□□□□ 0.4
LYSMD4Q5XG99 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
LYSMD4Q5XG99 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
LYSMD4Q5XG99 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LYSMD4Q5XG99 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LYSMD4Q5XG99 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LYSMD4Q5XG99 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.56■□□□□ 0.4
LYSMD4Q5XG99 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
LYSMD4Q5XG99 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LYSMD4Q5XG99 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LYSMD4Q5XG99 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LYSMD4Q5XG99 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LYSMD4Q5XG99 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LYSMD4Q5XG99 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.55■□□□□ 0.4
LYSMD4Q5XG99 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.55■□□□□ 0.4
LYSMD4Q5XG99 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
LYSMD4Q5XG99 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LYSMD4Q5XG99 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
LYSMD4Q5XG99 AL020989.1-201ENST00000422979 469 ntBASIC17.55■□□□□ 0.4
LYSMD4Q5XG99 ALG1L5P-201ENST00000482043 771 ntBASIC17.55■□□□□ 0.4
LYSMD4Q5XG99 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LYSMD4Q5XG99 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.55■□□□□ 0.4
LYSMD4Q5XG99 YBX1P5-201ENST00000509441 847 ntBASIC17.55■□□□□ 0.4
LYSMD4Q5XG99 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.55■□□□□ 0.4
LYSMD4Q5XG99 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.55■□□□□ 0.4
LYSMD4Q5XG99 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.55■□□□□ 0.4
LYSMD4Q5XG99 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
LYSMD4Q5XG99 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
LYSMD4Q5XG99 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
LYSMD4Q5XG99 AC005332.7-201ENST00000614046 2005 ntBASIC17.55■□□□□ 0.4
LYSMD4Q5XG99 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
LYSMD4Q5XG99 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
LYSMD4Q5XG99 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.55■□□□□ 0.4
LYSMD4Q5XG99 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LYSMD4Q5XG99 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
LYSMD4Q5XG99 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
LYSMD4Q5XG99 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.54■□□□□ 0.4
LYSMD4Q5XG99 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.54■□□□□ 0.4
LYSMD4Q5XG99 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LYSMD4Q5XG99 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LYSMD4Q5XG99 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LYSMD4Q5XG99 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LYSMD4Q5XG99 ELK2BP-201ENST00000415014 1224 ntBASIC17.54■□□□□ 0.4
LYSMD4Q5XG99 AC254562.1-201ENST00000417586 456 ntBASIC17.54■□□□□ 0.4
LYSMD4Q5XG99 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.54■□□□□ 0.4
LYSMD4Q5XG99 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.54■□□□□ 0.4
LYSMD4Q5XG99 AC004706.3-202ENST00000621574 984 ntBASIC17.54■□□□□ 0.4
LYSMD4Q5XG99 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
LYSMD4Q5XG99 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LYSMD4Q5XG99 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LYSMD4Q5XG99 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.54■□□□□ 0.4
LYSMD4Q5XG99 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
LYSMD4Q5XG99 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
LYSMD4Q5XG99 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LYSMD4Q5XG99 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.54■□□□□ 0.4
LYSMD4Q5XG99 KRT8P47-201ENST00000604727 1398 ntBASIC17.53■□□□□ 0.4
LYSMD4Q5XG99 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LYSMD4Q5XG99 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LYSMD4Q5XG99 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
LYSMD4Q5XG99 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
LYSMD4Q5XG99 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.53■□□□□ 0.4
LYSMD4Q5XG99 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms