Protein–RNA interactions for Protein: Q5VTA0

PRAMEF17, PRAME family member 17, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF17Q5VTA0 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
PRAMEF17Q5VTA0 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.11■□□□□ 0.33
PRAMEF17Q5VTA0 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
PRAMEF17Q5VTA0 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF17Q5VTA0 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.11■□□□□ 0.33
PRAMEF17Q5VTA0 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF17Q5VTA0 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF17Q5VTA0 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF17Q5VTA0 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF17Q5VTA0 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.11■□□□□ 0.33
PRAMEF17Q5VTA0 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
PRAMEF17Q5VTA0 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PRAMEF17Q5VTA0 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF17Q5VTA0 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.11■□□□□ 0.33
PRAMEF17Q5VTA0 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF17Q5VTA0 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF17Q5VTA0 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF17Q5VTA0 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
PRAMEF17Q5VTA0 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF17Q5VTA0 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF17Q5VTA0 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PRAMEF17Q5VTA0 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PRAMEF17Q5VTA0 PHGDH-209ENST00000641074 1780 ntBASIC17.1■□□□□ 0.33
PRAMEF17Q5VTA0 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF17Q5VTA0 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF17Q5VTA0 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF17Q5VTA0 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF17Q5VTA0 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF17Q5VTA0 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF17Q5VTA0 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF17Q5VTA0 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF17Q5VTA0 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.1■□□□□ 0.33
PRAMEF17Q5VTA0 AP002469.2-201ENST00000531724 424 ntBASIC17.1■□□□□ 0.33
PRAMEF17Q5VTA0 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.1■□□□□ 0.33
PRAMEF17Q5VTA0 AL160237.2-201ENST00000556165 472 ntBASIC17.1■□□□□ 0.33
PRAMEF17Q5VTA0 AL591684.3-201ENST00000605187 298 ntBASIC17.1■□□□□ 0.33
PRAMEF17Q5VTA0 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF17Q5VTA0 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF17Q5VTA0 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.1■□□□□ 0.33
PRAMEF17Q5VTA0 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.1■□□□□ 0.33
PRAMEF17Q5VTA0 TP73-AS1-210ENST00000637775 1455 ntBASIC17.1■□□□□ 0.33
PRAMEF17Q5VTA0 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF17Q5VTA0 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF17Q5VTA0 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF17Q5VTA0 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRAMEF17Q5VTA0 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.09■□□□□ 0.33
PRAMEF17Q5VTA0 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF17Q5VTA0 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF17Q5VTA0 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PRAMEF17Q5VTA0 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF17Q5VTA0 MRPL3P1-201ENST00000400109 1033 ntBASIC17.09■□□□□ 0.33
PRAMEF17Q5VTA0 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF17Q5VTA0 POM121L3P-201ENST00000419331 1163 ntBASIC17.09■□□□□ 0.33
PRAMEF17Q5VTA0 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.09■□□□□ 0.33
PRAMEF17Q5VTA0 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.09■□□□□ 0.33
PRAMEF17Q5VTA0 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.09■□□□□ 0.33
PRAMEF17Q5VTA0 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF17Q5VTA0 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.09■□□□□ 0.33
PRAMEF17Q5VTA0 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.09■□□□□ 0.33
PRAMEF17Q5VTA0 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.09■□□□□ 0.33
PRAMEF17Q5VTA0 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF17Q5VTA0 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.09■□□□□ 0.33
PRAMEF17Q5VTA0 AL121912.1-201ENST00000603683 238 ntBASIC17.09■□□□□ 0.33
PRAMEF17Q5VTA0 AC114341.1-201ENST00000618070 349 ntBASIC17.09■□□□□ 0.33
PRAMEF17Q5VTA0 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.09■□□□□ 0.33
PRAMEF17Q5VTA0 REXO1L6P-202ENST00000619970 1078 ntBASIC17.09■□□□□ 0.33
PRAMEF17Q5VTA0 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.09■□□□□ 0.33
PRAMEF17Q5VTA0 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF17Q5VTA0 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF17Q5VTA0 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.09■□□□□ 0.33
PRAMEF17Q5VTA0 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF17Q5VTA0 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PRAMEF17Q5VTA0 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF17Q5VTA0 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF17Q5VTA0 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF17Q5VTA0 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
PRAMEF17Q5VTA0 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
PRAMEF17Q5VTA0 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.09■□□□□ 0.33
PRAMEF17Q5VTA0 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PRAMEF17Q5VTA0 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.09■□□□□ 0.33
PRAMEF17Q5VTA0 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF17Q5VTA0 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF17Q5VTA0 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF17Q5VTA0 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF17Q5VTA0 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRAMEF17Q5VTA0 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PRAMEF17Q5VTA0 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
PRAMEF17Q5VTA0 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.08■□□□□ 0.33
PRAMEF17Q5VTA0 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PRAMEF17Q5VTA0 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
PRAMEF17Q5VTA0 AC073592.3-201ENST00000625118 1834 ntBASIC17.08■□□□□ 0.33
PRAMEF17Q5VTA0 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
PRAMEF17Q5VTA0 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEF17Q5VTA0 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEF17Q5VTA0 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
PRAMEF17Q5VTA0 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEF17Q5VTA0 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.08■□□□□ 0.32
PRAMEF17Q5VTA0 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEF17Q5VTA0 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRAMEF17Q5VTA0 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms