Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC38Q5VT99 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC38Q5VT99 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC38Q5VT99 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.66■□□□□ 0.58
LRRC38Q5VT99 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.66■□□□□ 0.58
LRRC38Q5VT99 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.66■□□□□ 0.58
LRRC38Q5VT99 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
LRRC38Q5VT99 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC38Q5VT99 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
LRRC38Q5VT99 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.66■□□□□ 0.58
LRRC38Q5VT99 AC139887.4-201ENST00000607877 719 ntBASIC18.66■□□□□ 0.58
LRRC38Q5VT99 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.66■□□□□ 0.58
LRRC38Q5VT99 LINC01451-201ENST00000623792 534 ntBASIC18.66■□□□□ 0.58
LRRC38Q5VT99 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC38Q5VT99 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.66■□□□□ 0.58
LRRC38Q5VT99 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC38Q5VT99 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.66■□□□□ 0.58
LRRC38Q5VT99 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.66■□□□□ 0.58
LRRC38Q5VT99 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.66■□□□□ 0.58
LRRC38Q5VT99 KRT8P47-201ENST00000604727 1398 ntBASIC18.66■□□□□ 0.58
LRRC38Q5VT99 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC38Q5VT99 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.66■□□□□ 0.58
LRRC38Q5VT99 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC38Q5VT99 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC38Q5VT99 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC38Q5VT99 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC38Q5VT99 AC009949.1-201ENST00000623048 1830 ntBASIC18.65■□□□□ 0.58
LRRC38Q5VT99 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.65■□□□□ 0.58
LRRC38Q5VT99 PP12613-201ENST00000424958 2230 ntBASIC18.65■□□□□ 0.58
LRRC38Q5VT99 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC38Q5VT99 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC38Q5VT99 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.65■□□□□ 0.58
LRRC38Q5VT99 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
LRRC38Q5VT99 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC38Q5VT99 HLA-J-201ENST00000462773 1622 ntBASIC18.65■□□□□ 0.58
LRRC38Q5VT99 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC38Q5VT99 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC38Q5VT99 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.65■□□□□ 0.58
LRRC38Q5VT99 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.65■□□□□ 0.58
LRRC38Q5VT99 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC38Q5VT99 AC004263.2-201ENST00000617183 678 ntBASIC18.65■□□□□ 0.58
LRRC38Q5VT99 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC38Q5VT99 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.65■□□□□ 0.58
LRRC38Q5VT99 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.65■□□□□ 0.58
LRRC38Q5VT99 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC38Q5VT99 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
LRRC38Q5VT99 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC38Q5VT99 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
LRRC38Q5VT99 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.65■□□□□ 0.58
LRRC38Q5VT99 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
LRRC38Q5VT99 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC38Q5VT99 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC38Q5VT99 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC38Q5VT99 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.65■□□□□ 0.58
LRRC38Q5VT99 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC38Q5VT99 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.65■□□□□ 0.58
LRRC38Q5VT99 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.65■□□□□ 0.58
LRRC38Q5VT99 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
LRRC38Q5VT99 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LRRC38Q5VT99 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LRRC38Q5VT99 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
LRRC38Q5VT99 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
LRRC38Q5VT99 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC38Q5VT99 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.64■□□□□ 0.57
LRRC38Q5VT99 AC139713.2-201ENST00000641328 2723 ntBASIC18.64■□□□□ 0.57
LRRC38Q5VT99 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.64■□□□□ 0.57
LRRC38Q5VT99 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC38Q5VT99 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC38Q5VT99 MIR662-201ENST00000384847 95 ntBASIC18.64■□□□□ 0.57
LRRC38Q5VT99 AC117947.1-201ENST00000427448 529 ntBASIC18.64■□□□□ 0.57
LRRC38Q5VT99 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.64■□□□□ 0.57
LRRC38Q5VT99 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.64■□□□□ 0.57
LRRC38Q5VT99 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.64■□□□□ 0.57
LRRC38Q5VT99 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
LRRC38Q5VT99 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.64■□□□□ 0.57
LRRC38Q5VT99 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.64■□□□□ 0.57
LRRC38Q5VT99 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.64■□□□□ 0.57
LRRC38Q5VT99 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.64■□□□□ 0.57
LRRC38Q5VT99 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC38Q5VT99 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
LRRC38Q5VT99 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC38Q5VT99 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC38Q5VT99 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
LRRC38Q5VT99 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
LRRC38Q5VT99 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
LRRC38Q5VT99 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC38Q5VT99 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC38Q5VT99 IGHGP-201ENST00000390555 1178 ntBASIC18.63■□□□□ 0.57
LRRC38Q5VT99 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
LRRC38Q5VT99 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC38Q5VT99 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.63■□□□□ 0.57
LRRC38Q5VT99 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
LRRC38Q5VT99 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.63■□□□□ 0.57
LRRC38Q5VT99 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC38Q5VT99 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC38Q5VT99 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC38Q5VT99 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC38Q5VT99 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC38Q5VT99 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC38Q5VT99 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms