Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL13A1Q5TAT6 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC20.01■□□□□ 0.79
COL13A1Q5TAT6 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL13A1Q5TAT6 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL13A1Q5TAT6 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL13A1Q5TAT6 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL13A1Q5TAT6 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL13A1Q5TAT6 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL13A1Q5TAT6 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
COL13A1Q5TAT6 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
COL13A1Q5TAT6 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC20.01■□□□□ 0.79
COL13A1Q5TAT6 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC20.01■□□□□ 0.79
COL13A1Q5TAT6 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL13A1Q5TAT6 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
COL13A1Q5TAT6 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC20.01■□□□□ 0.79
COL13A1Q5TAT6 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
COL13A1Q5TAT6 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL13A1Q5TAT6 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC20.01■□□□□ 0.79
COL13A1Q5TAT6 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC20.01■□□□□ 0.79
COL13A1Q5TAT6 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
COL13A1Q5TAT6 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
COL13A1Q5TAT6 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20■□□□□ 0.79
COL13A1Q5TAT6 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20■□□□□ 0.79
COL13A1Q5TAT6 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC20■□□□□ 0.79
COL13A1Q5TAT6 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC20■□□□□ 0.79
COL13A1Q5TAT6 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
COL13A1Q5TAT6 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL13A1Q5TAT6 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
COL13A1Q5TAT6 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
COL13A1Q5TAT6 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
COL13A1Q5TAT6 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL13A1Q5TAT6 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC20■□□□□ 0.79
COL13A1Q5TAT6 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
COL13A1Q5TAT6 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC20■□□□□ 0.79
COL13A1Q5TAT6 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
COL13A1Q5TAT6 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC20■□□□□ 0.79
COL13A1Q5TAT6 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20■□□□□ 0.79
COL13A1Q5TAT6 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL13A1Q5TAT6 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL13A1Q5TAT6 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
COL13A1Q5TAT6 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COL13A1Q5TAT6 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL13A1Q5TAT6 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL13A1Q5TAT6 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.99■□□□□ 0.79
COL13A1Q5TAT6 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
COL13A1Q5TAT6 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL13A1Q5TAT6 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL13A1Q5TAT6 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COL13A1Q5TAT6 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL13A1Q5TAT6 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COL13A1Q5TAT6 FALEC-201ENST00000416894 566 ntTSL 3 BASIC19.99■□□□□ 0.79
COL13A1Q5TAT6 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC19.99■□□□□ 0.79
COL13A1Q5TAT6 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
COL13A1Q5TAT6 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COL13A1Q5TAT6 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC19.99■□□□□ 0.79
COL13A1Q5TAT6 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.99■□□□□ 0.79
COL13A1Q5TAT6 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
COL13A1Q5TAT6 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL13A1Q5TAT6 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL13A1Q5TAT6 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COL13A1Q5TAT6 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.99■□□□□ 0.79
COL13A1Q5TAT6 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COL13A1Q5TAT6 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL13A1Q5TAT6 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL13A1Q5TAT6 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC19.99■□□□□ 0.79
COL13A1Q5TAT6 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COL13A1Q5TAT6 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL13A1Q5TAT6 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
COL13A1Q5TAT6 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL13A1Q5TAT6 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COL13A1Q5TAT6 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.98■□□□□ 0.79
COL13A1Q5TAT6 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL13A1Q5TAT6 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.98■□□□□ 0.79
COL13A1Q5TAT6 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COL13A1Q5TAT6 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.98■□□□□ 0.79
COL13A1Q5TAT6 AC006128.1-201ENST00000624704 1661 ntBASIC19.98■□□□□ 0.79
COL13A1Q5TAT6 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL13A1Q5TAT6 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL13A1Q5TAT6 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
COL13A1Q5TAT6 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COL13A1Q5TAT6 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COL13A1Q5TAT6 SPCS2P4-201ENST00000436160 681 ntBASIC19.98■□□□□ 0.79
COL13A1Q5TAT6 AC234783.1-201ENST00000441761 496 ntBASIC19.98■□□□□ 0.79
COL13A1Q5TAT6 LDHBP1-201ENST00000455730 1119 ntBASIC19.98■□□□□ 0.79
COL13A1Q5TAT6 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.98■□□□□ 0.79
COL13A1Q5TAT6 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC19.98■□□□□ 0.79
COL13A1Q5TAT6 AC112698.1-201ENST00000510299 916 ntBASIC19.98■□□□□ 0.79
COL13A1Q5TAT6 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC19.98■□□□□ 0.79
COL13A1Q5TAT6 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC19.98■□□□□ 0.79
COL13A1Q5TAT6 AC008735.3-201ENST00000596646 500 ntBASIC19.98■□□□□ 0.79
COL13A1Q5TAT6 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL13A1Q5TAT6 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL13A1Q5TAT6 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL13A1Q5TAT6 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC19.98■□□□□ 0.79
COL13A1Q5TAT6 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COL13A1Q5TAT6 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.98■□□□□ 0.79
COL13A1Q5TAT6 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
COL13A1Q5TAT6 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COL13A1Q5TAT6 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
COL13A1Q5TAT6 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms