Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
LRIF1Q5T3J3 MIR1238-201ENST00000408483 83 ntBASIC16.95■□□□□ 0.3
LRIF1Q5T3J3 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.95■□□□□ 0.3
LRIF1Q5T3J3 TSPY7P-201ENST00000431358 1114 ntBASIC16.95■□□□□ 0.3
LRIF1Q5T3J3 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.95■□□□□ 0.3
LRIF1Q5T3J3 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRIF1Q5T3J3 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.95■□□□□ 0.3
LRIF1Q5T3J3 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.95■□□□□ 0.3
LRIF1Q5T3J3 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.95■□□□□ 0.3
LRIF1Q5T3J3 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRIF1Q5T3J3 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
LRIF1Q5T3J3 AC024243.1-201ENST00000609234 778 ntBASIC16.95■□□□□ 0.3
LRIF1Q5T3J3 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.95■□□□□ 0.3
LRIF1Q5T3J3 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.95■□□□□ 0.3
LRIF1Q5T3J3 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
LRIF1Q5T3J3 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.95■□□□□ 0.3
LRIF1Q5T3J3 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.95■□□□□ 0.3
LRIF1Q5T3J3 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRIF1Q5T3J3 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRIF1Q5T3J3 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRIF1Q5T3J3 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRIF1Q5T3J3 AD000864.1-201ENST00000624076 2295 ntBASIC16.95■□□□□ 0.3
LRIF1Q5T3J3 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRIF1Q5T3J3 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRIF1Q5T3J3 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.95■□□□□ 0.3
LRIF1Q5T3J3 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRIF1Q5T3J3 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRIF1Q5T3J3 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.95■□□□□ 0.3
LRIF1Q5T3J3 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRIF1Q5T3J3 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.94■□□□□ 0.3
LRIF1Q5T3J3 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRIF1Q5T3J3 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRIF1Q5T3J3 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRIF1Q5T3J3 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
LRIF1Q5T3J3 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRIF1Q5T3J3 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRIF1Q5T3J3 AC012313.1-201ENST00000593393 3059 ntBASIC16.94■□□□□ 0.3
LRIF1Q5T3J3 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRIF1Q5T3J3 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRIF1Q5T3J3 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.94■□□□□ 0.3
LRIF1Q5T3J3 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRIF1Q5T3J3 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRIF1Q5T3J3 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.94■□□□□ 0.3
LRIF1Q5T3J3 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRIF1Q5T3J3 INGX-201ENST00000359239 846 ntBASIC16.94■□□□□ 0.3
LRIF1Q5T3J3 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.94■□□□□ 0.3
LRIF1Q5T3J3 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.94■□□□□ 0.3
LRIF1Q5T3J3 AC009947.2-201ENST00000444014 672 ntBASIC16.94■□□□□ 0.3
LRIF1Q5T3J3 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.94■□□□□ 0.3
LRIF1Q5T3J3 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.94■□□□□ 0.3
LRIF1Q5T3J3 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.94■□□□□ 0.3
LRIF1Q5T3J3 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRIF1Q5T3J3 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.94■□□□□ 0.3
LRIF1Q5T3J3 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRIF1Q5T3J3 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRIF1Q5T3J3 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.94■□□□□ 0.3
LRIF1Q5T3J3 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRIF1Q5T3J3 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
LRIF1Q5T3J3 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRIF1Q5T3J3 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
LRIF1Q5T3J3 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
LRIF1Q5T3J3 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.94■□□□□ 0.3
LRIF1Q5T3J3 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.94■□□□□ 0.3
LRIF1Q5T3J3 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRIF1Q5T3J3 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRIF1Q5T3J3 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRIF1Q5T3J3 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRIF1Q5T3J3 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.94■□□□□ 0.3
LRIF1Q5T3J3 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
LRIF1Q5T3J3 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
LRIF1Q5T3J3 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRIF1Q5T3J3 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.94■□□□□ 0.3
LRIF1Q5T3J3 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.94■□□□□ 0.3
LRIF1Q5T3J3 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.93■□□□□ 0.3
LRIF1Q5T3J3 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRIF1Q5T3J3 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRIF1Q5T3J3 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
LRIF1Q5T3J3 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRIF1Q5T3J3 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRIF1Q5T3J3 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.93■□□□□ 0.3
LRIF1Q5T3J3 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
LRIF1Q5T3J3 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
LRIF1Q5T3J3 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.93■□□□□ 0.3
LRIF1Q5T3J3 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.93■□□□□ 0.3
LRIF1Q5T3J3 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRIF1Q5T3J3 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
LRIF1Q5T3J3 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LRIF1Q5T3J3 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.93■□□□□ 0.3
LRIF1Q5T3J3 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRIF1Q5T3J3 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LRIF1Q5T3J3 MIR718-201ENST00000390190 70 ntBASIC16.93■□□□□ 0.3
LRIF1Q5T3J3 PVRIG2P-201ENST00000435460 978 ntBASIC16.93■□□□□ 0.3
LRIF1Q5T3J3 AC113404.2-201ENST00000507884 177 ntBASIC16.93■□□□□ 0.3
LRIF1Q5T3J3 AC008550.1-201ENST00000511500 884 ntBASIC16.93■□□□□ 0.3
LRIF1Q5T3J3 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
LRIF1Q5T3J3 NEK4P2-201ENST00000580004 1012 ntBASIC16.93■□□□□ 0.3
LRIF1Q5T3J3 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
LRIF1Q5T3J3 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
LRIF1Q5T3J3 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.93■□□□□ 0.3
LRIF1Q5T3J3 LINC01451-201ENST00000623792 534 ntBASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms