Protein–RNA interactions for Protein: Q5RL73

RBM48, RNA-binding protein 48, humanhuman

Known RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48Q5RL73 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RBM48Q5RL73 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RBM48Q5RL73 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RBM48Q5RL73 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RBM48Q5RL73 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
RBM48Q5RL73 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RBM48Q5RL73 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RBM48Q5RL73 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.41■□□□□ 0.22
RBM48Q5RL73 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RBM48Q5RL73 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
RBM48Q5RL73 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RBM48Q5RL73 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RBM48Q5RL73 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RBM48Q5RL73 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RBM48Q5RL73 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.4■□□□□ 0.22
RBM48Q5RL73 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.4■□□□□ 0.22
RBM48Q5RL73 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RBM48Q5RL73 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RBM48Q5RL73 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RBM48Q5RL73 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.4■□□□□ 0.22
RBM48Q5RL73 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RBM48Q5RL73 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC16.4■□□□□ 0.22
RBM48Q5RL73 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RBM48Q5RL73 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RBM48Q5RL73 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.4■□□□□ 0.22
RBM48Q5RL73 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC16.4■□□□□ 0.22
RBM48Q5RL73 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC16.4■□□□□ 0.22
RBM48Q5RL73 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC16.4■□□□□ 0.22
RBM48Q5RL73 AL050303.2-201ENST00000619798 666 ntBASIC16.4■□□□□ 0.22
RBM48Q5RL73 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RBM48Q5RL73 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RBM48Q5RL73 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RBM48Q5RL73 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.4■□□□□ 0.22
RBM48Q5RL73 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RBM48Q5RL73 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RBM48Q5RL73 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.4■□□□□ 0.22
RBM48Q5RL73 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RBM48Q5RL73 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC16.4■□□□□ 0.22
RBM48Q5RL73 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RBM48Q5RL73 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RBM48Q5RL73 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RBM48Q5RL73 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
RBM48Q5RL73 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.22
RBM48Q5RL73 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
RBM48Q5RL73 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.39■□□□□ 0.21
RBM48Q5RL73 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RBM48Q5RL73 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RBM48Q5RL73 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RBM48Q5RL73 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.39■□□□□ 0.21
RBM48Q5RL73 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RBM48Q5RL73 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.39■□□□□ 0.21
RBM48Q5RL73 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.39■□□□□ 0.21
RBM48Q5RL73 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.39■□□□□ 0.21
RBM48Q5RL73 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
RBM48Q5RL73 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RBM48Q5RL73 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC16.39■□□□□ 0.21
RBM48Q5RL73 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.39■□□□□ 0.21
RBM48Q5RL73 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC16.39■□□□□ 0.21
RBM48Q5RL73 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RBM48Q5RL73 DUTP2-201ENST00000519164 463 ntBASIC16.39■□□□□ 0.21
RBM48Q5RL73 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.39■□□□□ 0.21
RBM48Q5RL73 AC004264.1-201ENST00000608354 794 ntBASIC16.39■□□□□ 0.21
RBM48Q5RL73 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC16.39■□□□□ 0.21
RBM48Q5RL73 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RBM48Q5RL73 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RBM48Q5RL73 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.39■□□□□ 0.21
RBM48Q5RL73 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
RBM48Q5RL73 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
RBM48Q5RL73 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
RBM48Q5RL73 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RBM48Q5RL73 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RBM48Q5RL73 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.39■□□□□ 0.21
RBM48Q5RL73 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.39■□□□□ 0.21
RBM48Q5RL73 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RBM48Q5RL73 AL163051.1-201ENST00000569214 1512 ntBASIC16.39■□□□□ 0.21
RBM48Q5RL73 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RBM48Q5RL73 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RBM48Q5RL73 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RBM48Q5RL73 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RBM48Q5RL73 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RBM48Q5RL73 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.39■□□□□ 0.21
RBM48Q5RL73 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RBM48Q5RL73 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.38■□□□□ 0.21
RBM48Q5RL73 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
RBM48Q5RL73 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RBM48Q5RL73 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.38■□□□□ 0.21
RBM48Q5RL73 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RBM48Q5RL73 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RBM48Q5RL73 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.38■□□□□ 0.21
RBM48Q5RL73 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RBM48Q5RL73 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RBM48Q5RL73 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RBM48Q5RL73 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
RBM48Q5RL73 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RBM48Q5RL73 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
RBM48Q5RL73 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RBM48Q5RL73 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
RBM48Q5RL73 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RBM48Q5RL73 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RBM48Q5RL73 MIR663A-201ENST00000385250 93 ntBASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms