Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
RNFT1Q5M7Z0 FAM220CP-201ENST00000395253 831 ntBASIC16.14■□□□□ 0.17
RNFT1Q5M7Z0 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.14■□□□□ 0.17
RNFT1Q5M7Z0 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNFT1Q5M7Z0 AC093909.1-201ENST00000504731 1122 ntBASIC16.14■□□□□ 0.17
RNFT1Q5M7Z0 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNFT1Q5M7Z0 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.14■□□□□ 0.17
RNFT1Q5M7Z0 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.14■□□□□ 0.17
RNFT1Q5M7Z0 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.14■□□□□ 0.17
RNFT1Q5M7Z0 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.14■□□□□ 0.17
RNFT1Q5M7Z0 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.14■□□□□ 0.17
RNFT1Q5M7Z0 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.14■□□□□ 0.17
RNFT1Q5M7Z0 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNFT1Q5M7Z0 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNFT1Q5M7Z0 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RNFT1Q5M7Z0 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.14■□□□□ 0.17
RNFT1Q5M7Z0 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RNFT1Q5M7Z0 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.14■□□□□ 0.17
RNFT1Q5M7Z0 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNFT1Q5M7Z0 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RNFT1Q5M7Z0 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
RNFT1Q5M7Z0 WIZP1-201ENST00000531444 2299 ntBASIC16.14■□□□□ 0.17
RNFT1Q5M7Z0 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNFT1Q5M7Z0 AC098818.2-201ENST00000564925 2320 ntBASIC16.13■□□□□ 0.17
RNFT1Q5M7Z0 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.13■□□□□ 0.17
RNFT1Q5M7Z0 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNFT1Q5M7Z0 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.13■□□□□ 0.17
RNFT1Q5M7Z0 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNFT1Q5M7Z0 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNFT1Q5M7Z0 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.13■□□□□ 0.17
RNFT1Q5M7Z0 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNFT1Q5M7Z0 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNFT1Q5M7Z0 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
RNFT1Q5M7Z0 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNFT1Q5M7Z0 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RNFT1Q5M7Z0 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNFT1Q5M7Z0 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNFT1Q5M7Z0 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNFT1Q5M7Z0 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.13■□□□□ 0.17
RNFT1Q5M7Z0 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
RNFT1Q5M7Z0 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.13■□□□□ 0.17
RNFT1Q5M7Z0 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNFT1Q5M7Z0 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.13■□□□□ 0.17
RNFT1Q5M7Z0 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.13■□□□□ 0.17
RNFT1Q5M7Z0 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNFT1Q5M7Z0 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNFT1Q5M7Z0 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.13■□□□□ 0.17
RNFT1Q5M7Z0 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNFT1Q5M7Z0 AP000867.4-201ENST00000641616 219 ntBASIC16.13■□□□□ 0.17
RNFT1Q5M7Z0 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
RNFT1Q5M7Z0 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.13■□□□□ 0.17
RNFT1Q5M7Z0 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNFT1Q5M7Z0 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
RNFT1Q5M7Z0 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.13■□□□□ 0.17
RNFT1Q5M7Z0 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNFT1Q5M7Z0 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
RNFT1Q5M7Z0 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNFT1Q5M7Z0 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNFT1Q5M7Z0 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNFT1Q5M7Z0 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
RNFT1Q5M7Z0 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
RNFT1Q5M7Z0 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNFT1Q5M7Z0 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.12■□□□□ 0.17
RNFT1Q5M7Z0 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNFT1Q5M7Z0 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNFT1Q5M7Z0 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNFT1Q5M7Z0 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNFT1Q5M7Z0 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNFT1Q5M7Z0 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.12■□□□□ 0.17
RNFT1Q5M7Z0 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
RNFT1Q5M7Z0 AC096633.1-201ENST00000422446 749 ntBASIC16.12■□□□□ 0.17
RNFT1Q5M7Z0 PMS2P1-201ENST00000431037 1228 ntBASIC16.12■□□□□ 0.17
RNFT1Q5M7Z0 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.12■□□□□ 0.17
RNFT1Q5M7Z0 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNFT1Q5M7Z0 RPL13AP23-201ENST00000480739 586 ntBASIC16.12■□□□□ 0.17
RNFT1Q5M7Z0 AC012640.2-201ENST00000561606 901 ntBASIC16.12■□□□□ 0.17
RNFT1Q5M7Z0 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.12■□□□□ 0.17
RNFT1Q5M7Z0 NKAPP1-205ENST00000585790 367 ntBASIC16.12■□□□□ 0.17
RNFT1Q5M7Z0 AC025062.2-201ENST00000605477 670 ntBASIC16.12■□□□□ 0.17
RNFT1Q5M7Z0 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RNFT1Q5M7Z0 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC16.12■□□□□ 0.17
RNFT1Q5M7Z0 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
RNFT1Q5M7Z0 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
RNFT1Q5M7Z0 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNFT1Q5M7Z0 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
RNFT1Q5M7Z0 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNFT1Q5M7Z0 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.12■□□□□ 0.17
RNFT1Q5M7Z0 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.12■□□□□ 0.17
RNFT1Q5M7Z0 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
RNFT1Q5M7Z0 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNFT1Q5M7Z0 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNFT1Q5M7Z0 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNFT1Q5M7Z0 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNFT1Q5M7Z0 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNFT1Q5M7Z0 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNFT1Q5M7Z0 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RNFT1Q5M7Z0 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.12■□□□□ 0.17
RNFT1Q5M7Z0 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RNFT1Q5M7Z0 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.11■□□□□ 0.17
RNFT1Q5M7Z0 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms