Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
FREM1Q5H8C1 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
FREM1Q5H8C1 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
FREM1Q5H8C1 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.77■□□□□ 0.12
FREM1Q5H8C1 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
FREM1Q5H8C1 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
FREM1Q5H8C1 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
FREM1Q5H8C1 AC009949.1-201ENST00000623048 1830 ntBASIC15.77■□□□□ 0.12
FREM1Q5H8C1 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.77■□□□□ 0.12
FREM1Q5H8C1 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
FREM1Q5H8C1 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
FREM1Q5H8C1 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC15.77■□□□□ 0.12
FREM1Q5H8C1 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.77■□□□□ 0.12
FREM1Q5H8C1 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
FREM1Q5H8C1 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
FREM1Q5H8C1 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
FREM1Q5H8C1 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.11
FREM1Q5H8C1 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.77■□□□□ 0.11
FREM1Q5H8C1 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
FREM1Q5H8C1 FOSL1P1-201ENST00000511041 816 ntBASIC15.77■□□□□ 0.11
FREM1Q5H8C1 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.77■□□□□ 0.11
FREM1Q5H8C1 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.77■□□□□ 0.11
FREM1Q5H8C1 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
FREM1Q5H8C1 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC15.77■□□□□ 0.11
FREM1Q5H8C1 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
FREM1Q5H8C1 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC15.77■□□□□ 0.11
FREM1Q5H8C1 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC15.77■□□□□ 0.11
FREM1Q5H8C1 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
FREM1Q5H8C1 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
FREM1Q5H8C1 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
FREM1Q5H8C1 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.76■□□□□ 0.11
FREM1Q5H8C1 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.76■□□□□ 0.11
FREM1Q5H8C1 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FREM1Q5H8C1 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
FREM1Q5H8C1 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
FREM1Q5H8C1 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
FREM1Q5H8C1 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
FREM1Q5H8C1 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.76■□□□□ 0.11
FREM1Q5H8C1 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.76■□□□□ 0.11
FREM1Q5H8C1 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.76■□□□□ 0.11
FREM1Q5H8C1 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
FREM1Q5H8C1 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
FREM1Q5H8C1 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.76■□□□□ 0.11
FREM1Q5H8C1 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FREM1Q5H8C1 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FREM1Q5H8C1 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FREM1Q5H8C1 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC15.76■□□□□ 0.11
FREM1Q5H8C1 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FREM1Q5H8C1 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
FREM1Q5H8C1 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FREM1Q5H8C1 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FREM1Q5H8C1 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.76■□□□□ 0.11
FREM1Q5H8C1 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.76■□□□□ 0.11
FREM1Q5H8C1 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FREM1Q5H8C1 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FREM1Q5H8C1 AL354751.1-201ENST00000412768 1863 ntBASIC15.76■□□□□ 0.11
FREM1Q5H8C1 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FREM1Q5H8C1 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.76■□□□□ 0.11
FREM1Q5H8C1 AF238378.1-201ENST00000526806 358 ntBASIC15.76■□□□□ 0.11
FREM1Q5H8C1 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.76■□□□□ 0.11
FREM1Q5H8C1 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.76■□□□□ 0.11
FREM1Q5H8C1 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.76■□□□□ 0.11
FREM1Q5H8C1 SLC25A6P4-201ENST00000586535 553 ntBASIC15.76■□□□□ 0.11
FREM1Q5H8C1 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
FREM1Q5H8C1 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FREM1Q5H8C1 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FREM1Q5H8C1 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC15.76■□□□□ 0.11
FREM1Q5H8C1 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FREM1Q5H8C1 AP005117.1-201ENST00000584346 1413 ntBASIC15.76■□□□□ 0.11
FREM1Q5H8C1 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FREM1Q5H8C1 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FREM1Q5H8C1 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC15.75■□□□□ 0.11
FREM1Q5H8C1 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.75■□□□□ 0.11
FREM1Q5H8C1 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
FREM1Q5H8C1 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.75■□□□□ 0.11
FREM1Q5H8C1 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
FREM1Q5H8C1 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
FREM1Q5H8C1 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
FREM1Q5H8C1 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
FREM1Q5H8C1 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
FREM1Q5H8C1 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FREM1Q5H8C1 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
FREM1Q5H8C1 KLF4P1-201ENST00000412782 1185 ntBASIC15.75■□□□□ 0.11
FREM1Q5H8C1 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.75■□□□□ 0.11
FREM1Q5H8C1 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.75■□□□□ 0.11
FREM1Q5H8C1 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
FREM1Q5H8C1 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.75■□□□□ 0.11
FREM1Q5H8C1 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FREM1Q5H8C1 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
FREM1Q5H8C1 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
FREM1Q5H8C1 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
FREM1Q5H8C1 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FREM1Q5H8C1 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.75■□□□□ 0.11
FREM1Q5H8C1 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
FREM1Q5H8C1 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
FREM1Q5H8C1 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC15.75■□□□□ 0.11
FREM1Q5H8C1 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FREM1Q5H8C1 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
FREM1Q5H8C1 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
FREM1Q5H8C1 CD276-203ENST00000537340 2439 ntTSL 2 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms