Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LONRF3Q496Y0 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LONRF3Q496Y0 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.46■□□□□ 0.87
LONRF3Q496Y0 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
LONRF3Q496Y0 STARP1-201ENST00000397973 869 ntBASIC20.46■□□□□ 0.87
LONRF3Q496Y0 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC20.46■□□□□ 0.87
LONRF3Q496Y0 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.46■□□□□ 0.87
LONRF3Q496Y0 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.46■□□□□ 0.87
LONRF3Q496Y0 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LONRF3Q496Y0 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.46■□□□□ 0.87
LONRF3Q496Y0 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LONRF3Q496Y0 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC20.46■□□□□ 0.87
LONRF3Q496Y0 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LONRF3Q496Y0 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
LONRF3Q496Y0 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC20.46■□□□□ 0.87
LONRF3Q496Y0 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LONRF3Q496Y0 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LONRF3Q496Y0 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LONRF3Q496Y0 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LONRF3Q496Y0 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
LONRF3Q496Y0 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LONRF3Q496Y0 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LONRF3Q496Y0 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
LONRF3Q496Y0 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.45■□□□□ 0.87
LONRF3Q496Y0 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
LONRF3Q496Y0 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LONRF3Q496Y0 KRT18P55-202ENST00000578578 1546 ntBASIC20.45■□□□□ 0.86
LONRF3Q496Y0 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LONRF3Q496Y0 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.45■□□□□ 0.86
LONRF3Q496Y0 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.45■□□□□ 0.86
LONRF3Q496Y0 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
LONRF3Q496Y0 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LONRF3Q496Y0 ZNF444P1-201ENST00000559497 298 ntBASIC20.45■□□□□ 0.86
LONRF3Q496Y0 AC009065.1-201ENST00000564055 1225 ntBASIC20.45■□□□□ 0.86
LONRF3Q496Y0 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LONRF3Q496Y0 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
LONRF3Q496Y0 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LONRF3Q496Y0 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.45■□□□□ 0.86
LONRF3Q496Y0 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LONRF3Q496Y0 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC20.45■□□□□ 0.86
LONRF3Q496Y0 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LONRF3Q496Y0 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LONRF3Q496Y0 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
LONRF3Q496Y0 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
LONRF3Q496Y0 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
LONRF3Q496Y0 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
LONRF3Q496Y0 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LONRF3Q496Y0 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.44■□□□□ 0.86
LONRF3Q496Y0 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LONRF3Q496Y0 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LONRF3Q496Y0 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LONRF3Q496Y0 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LONRF3Q496Y0 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC20.44■□□□□ 0.86
LONRF3Q496Y0 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
LONRF3Q496Y0 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
LONRF3Q496Y0 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LONRF3Q496Y0 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.44■□□□□ 0.86
LONRF3Q496Y0 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.44■□□□□ 0.86
LONRF3Q496Y0 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.44■□□□□ 0.86
LONRF3Q496Y0 KRT18P56-201ENST00000507275 550 ntBASIC20.44■□□□□ 0.86
LONRF3Q496Y0 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.44■□□□□ 0.86
LONRF3Q496Y0 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.44■□□□□ 0.86
LONRF3Q496Y0 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
LONRF3Q496Y0 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.44■□□□□ 0.86
LONRF3Q496Y0 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.44■□□□□ 0.86
LONRF3Q496Y0 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.44■□□□□ 0.86
LONRF3Q496Y0 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LONRF3Q496Y0 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LONRF3Q496Y0 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LONRF3Q496Y0 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LONRF3Q496Y0 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LONRF3Q496Y0 AC132938.6-201ENST00000623828 1655 ntBASIC20.44■□□□□ 0.86
LONRF3Q496Y0 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
LONRF3Q496Y0 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC20.44■□□□□ 0.86
LONRF3Q496Y0 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LONRF3Q496Y0 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.44■□□□□ 0.86
LONRF3Q496Y0 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
LONRF3Q496Y0 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LONRF3Q496Y0 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LONRF3Q496Y0 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LONRF3Q496Y0 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LONRF3Q496Y0 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
LONRF3Q496Y0 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LONRF3Q496Y0 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LONRF3Q496Y0 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LONRF3Q496Y0 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
LONRF3Q496Y0 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.43■□□□□ 0.86
LONRF3Q496Y0 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.43■□□□□ 0.86
LONRF3Q496Y0 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC20.43■□□□□ 0.86
LONRF3Q496Y0 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.43■□□□□ 0.86
LONRF3Q496Y0 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC20.43■□□□□ 0.86
LONRF3Q496Y0 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.43■□□□□ 0.86
LONRF3Q496Y0 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.43■□□□□ 0.86
LONRF3Q496Y0 AC116407.4-201ENST00000623319 1061 ntBASIC20.43■□□□□ 0.86
LONRF3Q496Y0 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC20.43■□□□□ 0.86
LONRF3Q496Y0 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LONRF3Q496Y0 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
LONRF3Q496Y0 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LONRF3Q496Y0 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
LONRF3Q496Y0 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms