Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CFHR3Q02985 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CFHR3Q02985 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CFHR3Q02985 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CFHR3Q02985 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CFHR3Q02985 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CFHR3Q02985 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CFHR3Q02985 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC14.03□□□□□ -0.16
CFHR3Q02985 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CFHR3Q02985 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CFHR3Q02985 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CFHR3Q02985 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CFHR3Q02985 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CFHR3Q02985 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
CFHR3Q02985 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CFHR3Q02985 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CFHR3Q02985 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CFHR3Q02985 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CFHR3Q02985 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CFHR3Q02985 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CFHR3Q02985 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CFHR3Q02985 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
CFHR3Q02985 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CFHR3Q02985 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
CFHR3Q02985 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CFHR3Q02985 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CFHR3Q02985 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CFHR3Q02985 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CFHR3Q02985 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CFHR3Q02985 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CFHR3Q02985 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CFHR3Q02985 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CFHR3Q02985 AC125634.1-201ENST00000438758 1403 ntBASIC14.02□□□□□ -0.16
CFHR3Q02985 KRT8P47-201ENST00000604727 1398 ntBASIC14.02□□□□□ -0.17
CFHR3Q02985 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CFHR3Q02985 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
CFHR3Q02985 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CFHR3Q02985 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CFHR3Q02985 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
CFHR3Q02985 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
CFHR3Q02985 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CFHR3Q02985 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC14.02□□□□□ -0.17
CFHR3Q02985 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC14.02□□□□□ -0.17
CFHR3Q02985 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC14.02□□□□□ -0.17
CFHR3Q02985 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC14.02□□□□□ -0.17
CFHR3Q02985 PRELID1P1-202ENST00000567272 903 ntBASIC14.02□□□□□ -0.17
CFHR3Q02985 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC14.02□□□□□ -0.17
CFHR3Q02985 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC14.02□□□□□ -0.17
CFHR3Q02985 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CFHR3Q02985 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
CFHR3Q02985 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CFHR3Q02985 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CFHR3Q02985 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CFHR3Q02985 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
CFHR3Q02985 REXO1L9P-201ENST00000604264 2108 ntBASIC14.02□□□□□ -0.17
CFHR3Q02985 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CFHR3Q02985 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
CFHR3Q02985 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
CFHR3Q02985 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CFHR3Q02985 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
CFHR3Q02985 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CFHR3Q02985 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CFHR3Q02985 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CFHR3Q02985 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CFHR3Q02985 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CFHR3Q02985 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC14.01□□□□□ -0.17
CFHR3Q02985 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CFHR3Q02985 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CFHR3Q02985 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CFHR3Q02985 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CFHR3Q02985 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC14.01□□□□□ -0.17
CFHR3Q02985 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CFHR3Q02985 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CFHR3Q02985 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CFHR3Q02985 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CFHR3Q02985 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CFHR3Q02985 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC14.01□□□□□ -0.17
CFHR3Q02985 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CFHR3Q02985 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CFHR3Q02985 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CFHR3Q02985 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CFHR3Q02985 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CFHR3Q02985 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CFHR3Q02985 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CFHR3Q02985 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CFHR3Q02985 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC14.01□□□□□ -0.17
CFHR3Q02985 MEG3-211ENST00000452514 461 ntTSL 3 BASIC14.01□□□□□ -0.17
CFHR3Q02985 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC14.01□□□□□ -0.17
CFHR3Q02985 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC14.01□□□□□ -0.17
CFHR3Q02985 CBFB-203ENST00000561924 584 ntTSL 5 BASIC14.01□□□□□ -0.17
CFHR3Q02985 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC14.01□□□□□ -0.17
CFHR3Q02985 BNIP3P18-201ENST00000593976 575 ntBASIC14.01□□□□□ -0.17
CFHR3Q02985 CCNC-219ENST00000627680 896 ntTSL 5 BASIC14.01□□□□□ -0.17
CFHR3Q02985 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC14.01□□□□□ -0.17
CFHR3Q02985 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CFHR3Q02985 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC14.01□□□□□ -0.17
CFHR3Q02985 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
CFHR3Q02985 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CFHR3Q02985 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CFHR3Q02985 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms