Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC12.74□□□□□ -0.37
RPL39P62891 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RPL39P62891 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RPL39P62891 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RPL39P62891 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RPL39P62891 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
RPL39P62891 AL121761.2-201ENST00000598007 1648 ntBASIC12.73□□□□□ -0.37
RPL39P62891 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC12.73□□□□□ -0.37
RPL39P62891 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RPL39P62891 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
RPL39P62891 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RPL39P62891 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RPL39P62891 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RPL39P62891 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC12.73□□□□□ -0.37
RPL39P62891 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
RPL39P62891 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
RPL39P62891 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RPL39P62891 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC12.73□□□□□ -0.37
RPL39P62891 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RPL39P62891 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RPL39P62891 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC12.73□□□□□ -0.37
RPL39P62891 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
RPL39P62891 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RPL39P62891 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
RPL39P62891 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RPL39P62891 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RPL39P62891 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC12.73□□□□□ -0.37
RPL39P62891 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RPL39P62891 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RPL39P62891 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
RPL39P62891 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC12.73□□□□□ -0.37
RPL39P62891 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC12.73□□□□□ -0.37
RPL39P62891 NIFKP9-201ENST00000419265 221 ntBASIC12.73□□□□□ -0.37
RPL39P62891 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC12.73□□□□□ -0.37
RPL39P62891 UNC93B5-201ENST00000530315 699 ntBASIC12.73□□□□□ -0.37
RPL39P62891 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC12.73□□□□□ -0.37
RPL39P62891 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC12.73□□□□□ -0.37
RPL39P62891 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC12.73□□□□□ -0.37
RPL39P62891 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC12.73□□□□□ -0.37
RPL39P62891 AC069544.1-201ENST00000609399 999 ntBASIC12.73□□□□□ -0.37
RPL39P62891 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RPL39P62891 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
RPL39P62891 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
RPL39P62891 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
RPL39P62891 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC12.73□□□□□ -0.37
RPL39P62891 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC12.73□□□□□ -0.37
RPL39P62891 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
RPL39P62891 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC12.73□□□□□ -0.37
RPL39P62891 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
RPL39P62891 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
RPL39P62891 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
RPL39P62891 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC12.73□□□□□ -0.37
RPL39P62891 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
RPL39P62891 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RPL39P62891 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC12.73□□□□□ -0.37
RPL39P62891 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RPL39P62891 TBC1D3P2-202ENST00000577902 1649 ntBASIC12.73□□□□□ -0.37
RPL39P62891 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
RPL39P62891 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RPL39P62891 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC12.72□□□□□ -0.37
RPL39P62891 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RPL39P62891 AC009102.3-201ENST00000623118 1491 ntBASIC12.72□□□□□ -0.37
RPL39P62891 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC12.72□□□□□ -0.37
RPL39P62891 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RPL39P62891 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC12.72□□□□□ -0.37
RPL39P62891 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RPL39P62891 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
RPL39P62891 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC12.72□□□□□ -0.37
RPL39P62891 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RPL39P62891 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RPL39P62891 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RPL39P62891 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RPL39P62891 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RPL39P62891 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RPL39P62891 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC12.72□□□□□ -0.37
RPL39P62891 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RPL39P62891 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC12.72□□□□□ -0.37
RPL39P62891 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RPL39P62891 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
RPL39P62891 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RPL39P62891 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RPL39P62891 AC239809.2-201ENST00000415381 517 ntBASIC12.72□□□□□ -0.37
RPL39P62891 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
RPL39P62891 MCCD1P1-208ENST00000445732 328 ntBASIC12.72□□□□□ -0.37
RPL39P62891 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC12.72□□□□□ -0.37
RPL39P62891 AC008403.3-201ENST00000598924 454 ntBASIC12.72□□□□□ -0.37
RPL39P62891 AC011298.2-201ENST00000617989 482 ntBASIC12.72□□□□□ -0.37
RPL39P62891 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC12.72□□□□□ -0.37
RPL39P62891 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC12.72□□□□□ -0.37
RPL39P62891 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
RPL39P62891 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC12.72□□□□□ -0.37
RPL39P62891 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RPL39P62891 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
RPL39P62891 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
RPL39P62891 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC12.72□□□□□ -0.37
RPL39P62891 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC12.72□□□□□ -0.37
RPL39P62891 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
RPL39P62891 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
RPL39P62891 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RPL39P62891 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms