Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC12.62□□□□□ -0.39
CKS1BP61024 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CKS1BP61024 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CKS1BP61024 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CKS1BP61024 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CKS1BP61024 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CKS1BP61024 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CKS1BP61024 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CKS1BP61024 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CKS1BP61024 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC12.62□□□□□ -0.39
CKS1BP61024 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
CKS1BP61024 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CKS1BP61024 TREX2-204ENST00000370212 861 ntTSL 5 BASIC12.62□□□□□ -0.39
CKS1BP61024 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CKS1BP61024 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CKS1BP61024 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
CKS1BP61024 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC12.62□□□□□ -0.39
CKS1BP61024 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC12.62□□□□□ -0.39
CKS1BP61024 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC12.62□□□□□ -0.39
CKS1BP61024 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CKS1BP61024 AC097658.1-201ENST00000475555 843 ntBASIC12.62□□□□□ -0.39
CKS1BP61024 OR2A1-AS1-207ENST00000486094 819 ntBASIC12.62□□□□□ -0.39
CKS1BP61024 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC12.62□□□□□ -0.39
CKS1BP61024 OAS3-207ENST00000551007 998 ntTSL 2 BASIC12.62□□□□□ -0.39
CKS1BP61024 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC12.62□□□□□ -0.39
CKS1BP61024 AL137784.2-201ENST00000607332 1000 ntBASIC12.62□□□□□ -0.39
CKS1BP61024 AC092118.2-201ENST00000613495 667 ntBASIC12.62□□□□□ -0.39
CKS1BP61024 AL121829.2-201ENST00000620908 328 ntBASIC12.62□□□□□ -0.39
CKS1BP61024 MARS-234ENST00000630571 216 ntTSL 5 BASIC12.62□□□□□ -0.39
CKS1BP61024 MARS-235ENST00000630803 183 ntTSL 3 BASIC12.62□□□□□ -0.39
CKS1BP61024 AC073111.5-205ENST00000641717 521 ntBASIC12.62□□□□□ -0.39
CKS1BP61024 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CKS1BP61024 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CKS1BP61024 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CKS1BP61024 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CKS1BP61024 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CKS1BP61024 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC12.62□□□□□ -0.39
CKS1BP61024 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CKS1BP61024 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CKS1BP61024 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
CKS1BP61024 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CKS1BP61024 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CKS1BP61024 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
CKS1BP61024 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CKS1BP61024 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CKS1BP61024 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CKS1BP61024 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CKS1BP61024 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CKS1BP61024 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CKS1BP61024 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC12.62□□□□□ -0.39
CKS1BP61024 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CKS1BP61024 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CKS1BP61024 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CKS1BP61024 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CKS1BP61024 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CKS1BP61024 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CKS1BP61024 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CKS1BP61024 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CKS1BP61024 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CKS1BP61024 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CKS1BP61024 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CKS1BP61024 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CKS1BP61024 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CKS1BP61024 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
CKS1BP61024 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CKS1BP61024 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CKS1BP61024 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CKS1BP61024 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
CKS1BP61024 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
CKS1BP61024 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC12.61□□□□□ -0.39
CKS1BP61024 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CKS1BP61024 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CKS1BP61024 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CKS1BP61024 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
CKS1BP61024 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CKS1BP61024 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC12.61□□□□□ -0.39
CKS1BP61024 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CKS1BP61024 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC12.61□□□□□ -0.39
CKS1BP61024 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC12.61□□□□□ -0.39
CKS1BP61024 ABALON-201ENST00000629058 1903 ntBASIC12.61□□□□□ -0.39
CKS1BP61024 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC12.61□□□□□ -0.39
CKS1BP61024 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CKS1BP61024 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CKS1BP61024 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CKS1BP61024 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CKS1BP61024 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC12.61□□□□□ -0.39
CKS1BP61024 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC12.61□□□□□ -0.39
CKS1BP61024 AC006970.2-201ENST00000450065 779 ntBASIC12.61□□□□□ -0.39
CKS1BP61024 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC12.61□□□□□ -0.39
CKS1BP61024 AC091874.3-201ENST00000512672 1195 ntBASIC12.61□□□□□ -0.39
CKS1BP61024 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC12.61□□□□□ -0.39
CKS1BP61024 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC12.61□□□□□ -0.39
CKS1BP61024 MIR4758-201ENST00000577688 71 ntBASIC12.61□□□□□ -0.39
CKS1BP61024 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC12.61□□□□□ -0.39
CKS1BP61024 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC12.61□□□□□ -0.39
CKS1BP61024 AL121832.2-201ENST00000610979 668 ntBASIC12.61□□□□□ -0.39
CKS1BP61024 HLA-B-256ENST00000639848 1089 ntBASIC12.61□□□□□ -0.39
CKS1BP61024 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CKS1BP61024 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CKS1BP61024 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms