Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN8P56748 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.1■□□□□ 0.33
CLDN8P56748 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN8P56748 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN8P56748 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN8P56748 ECEL1P3-201ENST00000427961 737 ntBASIC17.1■□□□□ 0.33
CLDN8P56748 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.1■□□□□ 0.33
CLDN8P56748 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.1■□□□□ 0.33
CLDN8P56748 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.1■□□□□ 0.33
CLDN8P56748 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CLDN8P56748 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN8P56748 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CLDN8P56748 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CLDN8P56748 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CLDN8P56748 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN8P56748 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.1■□□□□ 0.33
CLDN8P56748 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN8P56748 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN8P56748 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN8P56748 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN8P56748 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
CLDN8P56748 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN8P56748 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CLDN8P56748 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN8P56748 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN8P56748 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CLDN8P56748 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN8P56748 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CLDN8P56748 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN8P56748 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.09■□□□□ 0.33
CLDN8P56748 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN8P56748 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN8P56748 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN8P56748 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN8P56748 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN8P56748 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN8P56748 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.09■□□□□ 0.33
CLDN8P56748 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.09■□□□□ 0.33
CLDN8P56748 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.09■□□□□ 0.33
CLDN8P56748 AC116407.2-201ENST00000613639 860 ntBASIC17.09■□□□□ 0.33
CLDN8P56748 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN8P56748 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.09■□□□□ 0.33
CLDN8P56748 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.09■□□□□ 0.33
CLDN8P56748 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
CLDN8P56748 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN8P56748 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN8P56748 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN8P56748 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
CLDN8P56748 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CLDN8P56748 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CLDN8P56748 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CLDN8P56748 LINC00304-203ENST00000565008 1864 ntBASIC17.09■□□□□ 0.33
CLDN8P56748 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.09■□□□□ 0.33
CLDN8P56748 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
CLDN8P56748 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.09■□□□□ 0.33
CLDN8P56748 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN8P56748 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.09■□□□□ 0.33
CLDN8P56748 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.09■□□□□ 0.33
CLDN8P56748 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN8P56748 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN8P56748 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLDN8P56748 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLDN8P56748 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.08■□□□□ 0.33
CLDN8P56748 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLDN8P56748 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CLDN8P56748 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.08■□□□□ 0.33
CLDN8P56748 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CLDN8P56748 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.08■□□□□ 0.32
CLDN8P56748 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.08■□□□□ 0.32
CLDN8P56748 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN8P56748 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN8P56748 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.08■□□□□ 0.32
CLDN8P56748 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN8P56748 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN8P56748 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.08■□□□□ 0.32
CLDN8P56748 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN8P56748 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.08■□□□□ 0.32
CLDN8P56748 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN8P56748 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.08■□□□□ 0.32
CLDN8P56748 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.08■□□□□ 0.32
CLDN8P56748 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.08■□□□□ 0.32
CLDN8P56748 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN8P56748 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN8P56748 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN8P56748 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN8P56748 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN8P56748 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN8P56748 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CLDN8P56748 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN8P56748 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN8P56748 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CLDN8P56748 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.08■□□□□ 0.32
CLDN8P56748 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN8P56748 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN8P56748 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CLDN8P56748 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CLDN8P56748 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN8P56748 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.07■□□□□ 0.32
CLDN8P56748 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CLDN8P56748 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms