Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
WNT3AP56704 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
WNT3AP56704 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
WNT3AP56704 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.18■□□□□ 0.5
WNT3AP56704 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.18■□□□□ 0.5
WNT3AP56704 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
WNT3AP56704 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
WNT3AP56704 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
WNT3AP56704 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
WNT3AP56704 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.17■□□□□ 0.5
WNT3AP56704 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
WNT3AP56704 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
WNT3AP56704 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
WNT3AP56704 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.17■□□□□ 0.5
WNT3AP56704 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
WNT3AP56704 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
WNT3AP56704 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
WNT3AP56704 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
WNT3AP56704 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
WNT3AP56704 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
WNT3AP56704 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
WNT3AP56704 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.17■□□□□ 0.5
WNT3AP56704 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.17■□□□□ 0.5
WNT3AP56704 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.17■□□□□ 0.5
WNT3AP56704 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.17■□□□□ 0.5
WNT3AP56704 AL136038.3-201ENST00000561909 1096 ntBASIC18.17■□□□□ 0.5
WNT3AP56704 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.17■□□□□ 0.5
WNT3AP56704 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.17■□□□□ 0.5
WNT3AP56704 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.17■□□□□ 0.5
WNT3AP56704 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
WNT3AP56704 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
WNT3AP56704 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
WNT3AP56704 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
WNT3AP56704 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
WNT3AP56704 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
WNT3AP56704 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
WNT3AP56704 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.17■□□□□ 0.5
WNT3AP56704 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.17■□□□□ 0.5
WNT3AP56704 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.17■□□□□ 0.5
WNT3AP56704 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
WNT3AP56704 AC006116.8-202ENST00000587620 1550 ntBASIC18.17■□□□□ 0.5
WNT3AP56704 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
WNT3AP56704 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
WNT3AP56704 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
WNT3AP56704 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
WNT3AP56704 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
WNT3AP56704 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
WNT3AP56704 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
WNT3AP56704 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
WNT3AP56704 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
WNT3AP56704 GNAS-203ENST00000306120 1878 ntBASIC18.16■□□□□ 0.5
WNT3AP56704 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
WNT3AP56704 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.16■□□□□ 0.5
WNT3AP56704 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
WNT3AP56704 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.16■□□□□ 0.5
WNT3AP56704 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
WNT3AP56704 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.16■□□□□ 0.5
WNT3AP56704 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.16■□□□□ 0.5
WNT3AP56704 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.16■□□□□ 0.5
WNT3AP56704 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.16■□□□□ 0.5
WNT3AP56704 AL590326.2-201ENST00000625139 305 ntBASIC18.16■□□□□ 0.5
WNT3AP56704 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.16■□□□□ 0.5
WNT3AP56704 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
WNT3AP56704 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
WNT3AP56704 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.16■□□□□ 0.5
WNT3AP56704 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
WNT3AP56704 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
WNT3AP56704 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
WNT3AP56704 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
WNT3AP56704 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
WNT3AP56704 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
WNT3AP56704 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
WNT3AP56704 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
WNT3AP56704 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
WNT3AP56704 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.15■□□□□ 0.5
WNT3AP56704 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.15■□□□□ 0.5
WNT3AP56704 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
WNT3AP56704 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
WNT3AP56704 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
WNT3AP56704 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.15■□□□□ 0.5
WNT3AP56704 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
WNT3AP56704 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
WNT3AP56704 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
WNT3AP56704 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
WNT3AP56704 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.15■□□□□ 0.5
WNT3AP56704 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.15■□□□□ 0.5
WNT3AP56704 AL121956.5-201ENST00000625261 221 ntBASIC18.15■□□□□ 0.5
WNT3AP56704 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
WNT3AP56704 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.15■□□□□ 0.5
WNT3AP56704 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.15■□□□□ 0.5
WNT3AP56704 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
WNT3AP56704 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
WNT3AP56704 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
WNT3AP56704 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
WNT3AP56704 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
WNT3AP56704 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
WNT3AP56704 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
WNT3AP56704 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.14■□□□□ 0.5
WNT3AP56704 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.14■□□□□ 0.5
WNT3AP56704 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms