Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
FOXG1P55316 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.75■□□□□ 0.11
FOXG1P55316 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.75■□□□□ 0.11
FOXG1P55316 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.75■□□□□ 0.11
FOXG1P55316 AC138894.3-201ENST00000603787 634 ntBASIC15.75■□□□□ 0.11
FOXG1P55316 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
FOXG1P55316 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FOXG1P55316 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
FOXG1P55316 AC018470.1-201ENST00000624790 3129 ntBASIC15.75■□□□□ 0.11
FOXG1P55316 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC15.75■□□□□ 0.11
FOXG1P55316 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
FOXG1P55316 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FOXG1P55316 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
FOXG1P55316 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
FOXG1P55316 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
FOXG1P55316 AC138028.4-201ENST00000564984 1845 ntBASIC15.75■□□□□ 0.11
FOXG1P55316 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FOXG1P55316 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
FOXG1P55316 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
FOXG1P55316 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FOXG1P55316 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FOXG1P55316 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXG1P55316 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXG1P55316 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15.74■□□□□ 0.11
FOXG1P55316 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXG1P55316 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC15.74■□□□□ 0.11
FOXG1P55316 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
FOXG1P55316 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXG1P55316 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXG1P55316 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
FOXG1P55316 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
FOXG1P55316 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
FOXG1P55316 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXG1P55316 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXG1P55316 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXG1P55316 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXG1P55316 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXG1P55316 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
FOXG1P55316 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
FOXG1P55316 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.74■□□□□ 0.11
FOXG1P55316 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.74■□□□□ 0.11
FOXG1P55316 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
FOXG1P55316 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.74■□□□□ 0.11
FOXG1P55316 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.74■□□□□ 0.11
FOXG1P55316 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.74■□□□□ 0.11
FOXG1P55316 BNIP3P18-201ENST00000593976 575 ntBASIC15.74■□□□□ 0.11
FOXG1P55316 AL732292.2-201ENST00000609649 430 ntBASIC15.74■□□□□ 0.11
FOXG1P55316 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.74■□□□□ 0.11
FOXG1P55316 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXG1P55316 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.74■□□□□ 0.11
FOXG1P55316 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC15.74■□□□□ 0.11
FOXG1P55316 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
FOXG1P55316 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC15.74■□□□□ 0.11
FOXG1P55316 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
FOXG1P55316 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.74■□□□□ 0.11
FOXG1P55316 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC15.74■□□□□ 0.11
FOXG1P55316 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
FOXG1P55316 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
FOXG1P55316 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
FOXG1P55316 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
FOXG1P55316 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
FOXG1P55316 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.74■□□□□ 0.11
FOXG1P55316 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.73■□□□□ 0.11
FOXG1P55316 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXG1P55316 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
FOXG1P55316 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
FOXG1P55316 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXG1P55316 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
FOXG1P55316 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
FOXG1P55316 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.73■□□□□ 0.11
FOXG1P55316 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXG1P55316 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.73■□□□□ 0.11
FOXG1P55316 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXG1P55316 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
FOXG1P55316 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC15.73■□□□□ 0.11
FOXG1P55316 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXG1P55316 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXG1P55316 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
FOXG1P55316 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.73■□□□□ 0.11
FOXG1P55316 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
FOXG1P55316 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
FOXG1P55316 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
FOXG1P55316 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.73■□□□□ 0.11
FOXG1P55316 VENTXP7-201ENST00000475503 772 ntBASIC15.73■□□□□ 0.11
FOXG1P55316 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXG1P55316 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.73■□□□□ 0.11
FOXG1P55316 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.73■□□□□ 0.11
FOXG1P55316 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
FOXG1P55316 PRELID1P1-202ENST00000567272 903 ntBASIC15.73■□□□□ 0.11
FOXG1P55316 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
FOXG1P55316 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.73■□□□□ 0.11
FOXG1P55316 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
FOXG1P55316 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXG1P55316 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXG1P55316 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.73■□□□□ 0.11
FOXG1P55316 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXG1P55316 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXG1P55316 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXG1P55316 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXG1P55316 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms