Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 AC080080.1-201ENST00000625121 2420 ntBASIC19.77■□□□□ 0.76
PMS1P54277 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.77■□□□□ 0.76
PMS1P54277 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PMS1P54277 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
PMS1P54277 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
PMS1P54277 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PMS1P54277 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PMS1P54277 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PMS1P54277 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PMS1P54277 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PMS1P54277 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PMS1P54277 STARP1-201ENST00000397973 869 ntBASIC19.77■□□□□ 0.76
PMS1P54277 AC211429.1-201ENST00000415277 523 ntBASIC19.77■□□□□ 0.76
PMS1P54277 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.77■□□□□ 0.76
PMS1P54277 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.77■□□□□ 0.76
PMS1P54277 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.77■□□□□ 0.76
PMS1P54277 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.77■□□□□ 0.76
PMS1P54277 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
PMS1P54277 AC004263.2-201ENST00000617183 678 ntBASIC19.77■□□□□ 0.76
PMS1P54277 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
PMS1P54277 AC006011.2-201ENST00000621313 1158 ntBASIC19.77■□□□□ 0.76
PMS1P54277 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.77■□□□□ 0.76
PMS1P54277 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
PMS1P54277 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.77■□□□□ 0.76
PMS1P54277 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
PMS1P54277 KRT89P-201ENST00000620027 1478 ntBASIC19.77■□□□□ 0.76
PMS1P54277 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PMS1P54277 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
PMS1P54277 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PMS1P54277 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.77■□□□□ 0.75
PMS1P54277 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PMS1P54277 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.76■□□□□ 0.75
PMS1P54277 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PMS1P54277 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PMS1P54277 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PMS1P54277 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
PMS1P54277 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
PMS1P54277 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.76■□□□□ 0.75
PMS1P54277 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.76■□□□□ 0.75
PMS1P54277 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PMS1P54277 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.76■□□□□ 0.75
PMS1P54277 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PMS1P54277 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PMS1P54277 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.76■□□□□ 0.75
PMS1P54277 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
PMS1P54277 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
PMS1P54277 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.76■□□□□ 0.75
PMS1P54277 BX664615.1-201ENST00000443558 458 ntBASIC19.76■□□□□ 0.75
PMS1P54277 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.76■□□□□ 0.75
PMS1P54277 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.76■□□□□ 0.75
PMS1P54277 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.76■□□□□ 0.75
PMS1P54277 AC008687.5-201ENST00000593746 558 ntBASIC19.76■□□□□ 0.75
PMS1P54277 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
PMS1P54277 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
PMS1P54277 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PMS1P54277 AL031432.5-201ENST00000641059 760 ntBASIC19.76■□□□□ 0.75
PMS1P54277 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
PMS1P54277 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PMS1P54277 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.76■□□□□ 0.75
PMS1P54277 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.76■□□□□ 0.75
PMS1P54277 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.76■□□□□ 0.75
PMS1P54277 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PMS1P54277 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PMS1P54277 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PMS1P54277 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PMS1P54277 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
PMS1P54277 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC19.75■□□□□ 0.75
PMS1P54277 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PMS1P54277 REXO1L11P-201ENST00000620964 1927 ntBASIC19.75■□□□□ 0.75
PMS1P54277 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PMS1P54277 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PMS1P54277 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
PMS1P54277 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.75■□□□□ 0.75
PMS1P54277 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PMS1P54277 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PMS1P54277 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.75■□□□□ 0.75
PMS1P54277 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.75■□□□□ 0.75
PMS1P54277 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.75■□□□□ 0.75
PMS1P54277 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
PMS1P54277 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
PMS1P54277 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PMS1P54277 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PMS1P54277 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PMS1P54277 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PMS1P54277 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.75■□□□□ 0.75
PMS1P54277 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.75■□□□□ 0.75
PMS1P54277 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.75■□□□□ 0.75
PMS1P54277 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.75■□□□□ 0.75
PMS1P54277 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.74■□□□□ 0.75
PMS1P54277 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PMS1P54277 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PMS1P54277 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PMS1P54277 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PMS1P54277 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
PMS1P54277 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PMS1P54277 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
PMS1P54277 LINC00304-203ENST00000565008 1864 ntBASIC19.74■□□□□ 0.75
PMS1P54277 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.74■□□□□ 0.75
PMS1P54277 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PMS1P54277 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms