Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 FLYWCH1P1-201ENST00000460917 1874 ntBASIC25.54■■□□□ 1.68
CLTCL1P53675 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CLTCL1P53675 PMP22-202ENST00000395936 816 ntTSL 3 BASIC25.54■■□□□ 1.68
CLTCL1P53675 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
CLTCL1P53675 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC25.54■■□□□ 1.68
CLTCL1P53675 AC023274.1-201ENST00000418278 595 ntBASIC25.54■■□□□ 1.68
CLTCL1P53675 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC25.54■■□□□ 1.68
CLTCL1P53675 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC25.54■■□□□ 1.68
CLTCL1P53675 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CLTCL1P53675 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CLTCL1P53675 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CLTCL1P53675 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CLTCL1P53675 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC25.53■■□□□ 1.68
CLTCL1P53675 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC25.53■■□□□ 1.68
CLTCL1P53675 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CLTCL1P53675 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
CLTCL1P53675 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CLTCL1P53675 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CLTCL1P53675 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC25.53■■□□□ 1.68
CLTCL1P53675 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CLTCL1P53675 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CLTCL1P53675 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
CLTCL1P53675 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC25.53■■□□□ 1.68
CLTCL1P53675 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC25.53■■□□□ 1.68
CLTCL1P53675 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CLTCL1P53675 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CLTCL1P53675 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CLTCL1P53675 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC25.53■■□□□ 1.68
CLTCL1P53675 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
CLTCL1P53675 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC25.53■■□□□ 1.68
CLTCL1P53675 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CLTCL1P53675 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
CLTCL1P53675 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC25.52■■□□□ 1.68
CLTCL1P53675 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC25.52■■□□□ 1.68
CLTCL1P53675 AC003669.1-201ENST00000334569 611 ntBASIC25.52■■□□□ 1.68
CLTCL1P53675 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
CLTCL1P53675 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CLTCL1P53675 HNRNPA1P28-201ENST00000424481 961 ntBASIC25.52■■□□□ 1.68
CLTCL1P53675 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CLTCL1P53675 DDX43P3-201ENST00000441064 443 ntBASIC25.52■■□□□ 1.68
CLTCL1P53675 KRT18P2-201ENST00000447938 1258 ntBASIC25.52■■□□□ 1.68
CLTCL1P53675 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC25.52■■□□□ 1.68
CLTCL1P53675 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC25.52■■□□□ 1.68
CLTCL1P53675 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC25.52■■□□□ 1.68
CLTCL1P53675 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC25.52■■□□□ 1.68
CLTCL1P53675 TMED1-207ENST00000591695 809 ntTSL 5 BASIC25.52■■□□□ 1.68
CLTCL1P53675 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC25.52■■□□□ 1.68
CLTCL1P53675 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC25.52■■□□□ 1.68
CLTCL1P53675 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC25.52■■□□□ 1.68
CLTCL1P53675 PGM5P2-202ENST00000637225 1043 ntBASIC25.52■■□□□ 1.68
CLTCL1P53675 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CLTCL1P53675 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CLTCL1P53675 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC25.52■■□□□ 1.68
CLTCL1P53675 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC25.52■■□□□ 1.68
CLTCL1P53675 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC25.52■■□□□ 1.68
CLTCL1P53675 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CLTCL1P53675 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC25.52■■□□□ 1.68
CLTCL1P53675 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
CLTCL1P53675 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC25.52■■□□□ 1.68
CLTCL1P53675 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CLTCL1P53675 USP49-202ENST00000373010 2446 ntTSL 5 BASIC25.52■■□□□ 1.68
CLTCL1P53675 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CLTCL1P53675 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CLTCL1P53675 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC25.52■■□□□ 1.68
CLTCL1P53675 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
CLTCL1P53675 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC25.52■■□□□ 1.68
CLTCL1P53675 S100A2-206ENST00000497140 697 ntTSL 2 BASIC25.52■■□□□ 1.68
CLTCL1P53675 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC25.52■■□□□ 1.68
CLTCL1P53675 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC25.51■■□□□ 1.68
CLTCL1P53675 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CLTCL1P53675 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
CLTCL1P53675 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC25.51■■□□□ 1.67
CLTCL1P53675 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CLTCL1P53675 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC25.51■■□□□ 1.67
CLTCL1P53675 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC25.51■■□□□ 1.67
CLTCL1P53675 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC25.51■■□□□ 1.67
CLTCL1P53675 DHDH-204ENST00000523250 634 ntTSL 5 BASIC25.51■■□□□ 1.67
CLTCL1P53675 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC25.51■■□□□ 1.67
CLTCL1P53675 AL805961.1-202ENST00000641562 540 ntBASIC25.51■■□□□ 1.67
CLTCL1P53675 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CLTCL1P53675 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
CLTCL1P53675 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CLTCL1P53675 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC25.51■■□□□ 1.67
CLTCL1P53675 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC25.51■■□□□ 1.67
CLTCL1P53675 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC25.51■■□□□ 1.67
CLTCL1P53675 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CLTCL1P53675 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
CLTCL1P53675 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC25.51■■□□□ 1.67
CLTCL1P53675 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC25.51■■□□□ 1.67
CLTCL1P53675 PC-208ENST00000529047 1607 ntTSL 3 BASIC25.51■■□□□ 1.67
CLTCL1P53675 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CLTCL1P53675 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC25.5■■□□□ 1.67
CLTCL1P53675 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
CLTCL1P53675 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CLTCL1P53675 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC25.5■■□□□ 1.67
CLTCL1P53675 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC25.5■■□□□ 1.67
CLTCL1P53675 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CLTCL1P53675 GID4-202ENST00000376345 1391 ntTSL 3 BASIC25.5■■□□□ 1.67
CLTCL1P53675 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
CLTCL1P53675 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms