Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC31.68■■■□□ 2.66
SMARCA2P51531 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
SMARCA2P51531 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC31.68■■■□□ 2.66
SMARCA2P51531 NKTR-203ENST00000442970 646 ntTSL 2 BASIC31.68■■■□□ 2.66
SMARCA2P51531 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC31.68■■■□□ 2.66
SMARCA2P51531 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC31.68■■■□□ 2.66
SMARCA2P51531 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC31.68■■■□□ 2.66
SMARCA2P51531 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC31.68■■■□□ 2.66
SMARCA2P51531 AC093010.1-201ENST00000473625 1624 ntBASIC31.68■■■□□ 2.66
SMARCA2P51531 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC31.68■■■□□ 2.66
SMARCA2P51531 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC31.67■■■□□ 2.66
SMARCA2P51531 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
SMARCA2P51531 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC31.67■■■□□ 2.66
SMARCA2P51531 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
SMARCA2P51531 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC31.67■■■□□ 2.66
SMARCA2P51531 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC31.67■■■□□ 2.66
SMARCA2P51531 AC074386.1-202ENST00000463561 864 ntBASIC31.67■■■□□ 2.66
SMARCA2P51531 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC31.67■■■□□ 2.66
SMARCA2P51531 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC31.67■■■□□ 2.66
SMARCA2P51531 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC31.67■■■□□ 2.66
SMARCA2P51531 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC31.67■■■□□ 2.66
SMARCA2P51531 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC31.67■■■□□ 2.66
SMARCA2P51531 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC31.67■■■□□ 2.66
SMARCA2P51531 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC31.67■■■□□ 2.66
SMARCA2P51531 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC31.67■■■□□ 2.66
SMARCA2P51531 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
SMARCA2P51531 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC31.66■■■□□ 2.66
SMARCA2P51531 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC31.66■■■□□ 2.66
SMARCA2P51531 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
SMARCA2P51531 TK1-204ENST00000590430 683 ntTSL 3 BASIC31.66■■■□□ 2.66
SMARCA2P51531 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC31.66■■■□□ 2.66
SMARCA2P51531 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
SMARCA2P51531 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
SMARCA2P51531 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
SMARCA2P51531 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC31.65■■■□□ 2.66
SMARCA2P51531 AC092474.2-201ENST00000424288 719 ntBASIC31.65■■■□□ 2.66
SMARCA2P51531 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC31.65■■■□□ 2.66
SMARCA2P51531 INO80C-206ENST00000586489 594 ntTSL 3 BASIC31.65■■■□□ 2.66
SMARCA2P51531 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC31.65■■■□□ 2.66
SMARCA2P51531 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC31.65■■■□□ 2.66
SMARCA2P51531 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
SMARCA2P51531 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC31.65■■■□□ 2.66
SMARCA2P51531 AFG3L1P-217ENST00000557444 2447 ntBASIC31.65■■■□□ 2.66
SMARCA2P51531 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
SMARCA2P51531 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC31.64■■■□□ 2.66
SMARCA2P51531 AQP6-203ENST00000551733 849 ntTSL 3 BASIC31.64■■■□□ 2.66
SMARCA2P51531 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC31.64■■■□□ 2.66
SMARCA2P51531 MIR4745-201ENST00000577608 62 ntBASIC31.64■■■□□ 2.66
SMARCA2P51531 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC31.64■■■□□ 2.66
SMARCA2P51531 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC31.64■■■□□ 2.66
SMARCA2P51531 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
SMARCA2P51531 SIRPAP1-201ENST00000448467 1770 ntBASIC31.64■■■□□ 2.66
SMARCA2P51531 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC31.64■■■□□ 2.66
SMARCA2P51531 AC025580.3-201ENST00000617932 1424 ntBASIC31.64■■■□□ 2.66
SMARCA2P51531 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC31.64■■■□□ 2.66
SMARCA2P51531 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC31.64■■■□□ 2.66
SMARCA2P51531 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC31.64■■■□□ 2.65
SMARCA2P51531 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC31.64■■■□□ 2.65
SMARCA2P51531 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC31.64■■■□□ 2.65
SMARCA2P51531 RBM7-207ENST00000544582 692 ntTSL 3 BASIC31.64■■■□□ 2.65
SMARCA2P51531 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC31.64■■■□□ 2.65
SMARCA2P51531 GGTLC5P-201ENST00000617623 998 ntBASIC31.64■■■□□ 2.65
SMARCA2P51531 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC31.64■■■□□ 2.65
SMARCA2P51531 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC31.64■■■□□ 2.65
SMARCA2P51531 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC31.63■■■□□ 2.65
SMARCA2P51531 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
SMARCA2P51531 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC31.63■■■□□ 2.65
SMARCA2P51531 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
SMARCA2P51531 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC31.63■■■□□ 2.65
SMARCA2P51531 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC31.63■■■□□ 2.65
SMARCA2P51531 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC31.63■■■□□ 2.65
SMARCA2P51531 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
SMARCA2P51531 SLBP-205ENST00000488267 987 ntTSL 2 BASIC31.63■■■□□ 2.65
SMARCA2P51531 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC31.63■■■□□ 2.65
SMARCA2P51531 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC31.63■■■□□ 2.65
SMARCA2P51531 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC31.63■■■□□ 2.65
SMARCA2P51531 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC31.63■■■□□ 2.65
SMARCA2P51531 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC31.63■■■□□ 2.65
SMARCA2P51531 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
SMARCA2P51531 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
SMARCA2P51531 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
SMARCA2P51531 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC31.63■■■□□ 2.65
SMARCA2P51531 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
SMARCA2P51531 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC31.63■■■□□ 2.65
SMARCA2P51531 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC31.63■■■□□ 2.65
SMARCA2P51531 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
SMARCA2P51531 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
SMARCA2P51531 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC31.62■■■□□ 2.65
SMARCA2P51531 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC31.62■■■□□ 2.65
SMARCA2P51531 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC31.62■■■□□ 2.65
SMARCA2P51531 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
SMARCA2P51531 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
SMARCA2P51531 TAF8-206ENST00000472818 719 ntTSL 2 BASIC31.62■■■□□ 2.65
SMARCA2P51531 PUDP-206ENST00000540122 825 ntTSL 2 BASIC31.62■■■□□ 2.65
SMARCA2P51531 AC023141.13-201ENST00000604991 943 ntBASIC31.62■■■□□ 2.65
SMARCA2P51531 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
SMARCA2P51531 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC31.62■■■□□ 2.65
SMARCA2P51531 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC31.62■■■□□ 2.65
SMARCA2P51531 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
SMARCA2P51531 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC31.61■■■□□ 2.65
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms