Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KRT6CP48668 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT6CP48668 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT6CP48668 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.45■□□□□ 0.38
KRT6CP48668 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT6CP48668 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
KRT6CP48668 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT6CP48668 AC006116.8-202ENST00000587620 1550 ntBASIC17.45■□□□□ 0.38
KRT6CP48668 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
KRT6CP48668 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.45■□□□□ 0.38
KRT6CP48668 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KRT6CP48668 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT6CP48668 AC012317.2-201ENST00000623305 2251 ntBASIC17.45■□□□□ 0.38
KRT6CP48668 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT6CP48668 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
KRT6CP48668 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
KRT6CP48668 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.45■□□□□ 0.38
KRT6CP48668 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT6CP48668 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT6CP48668 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
KRT6CP48668 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
KRT6CP48668 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.45■□□□□ 0.38
KRT6CP48668 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT6CP48668 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT6CP48668 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT6CP48668 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.45■□□□□ 0.38
KRT6CP48668 PVRIG2P-201ENST00000435460 978 ntBASIC17.45■□□□□ 0.38
KRT6CP48668 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT6CP48668 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT6CP48668 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.45■□□□□ 0.38
KRT6CP48668 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KRT6CP48668 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.45■□□□□ 0.38
KRT6CP48668 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.45■□□□□ 0.38
KRT6CP48668 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.45■□□□□ 0.38
KRT6CP48668 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
KRT6CP48668 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT6CP48668 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT6CP48668 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT6CP48668 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KRT6CP48668 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT6CP48668 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KRT6CP48668 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.45■□□□□ 0.38
KRT6CP48668 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KRT6CP48668 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KRT6CP48668 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.45■□□□□ 0.38
KRT6CP48668 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT6CP48668 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KRT6CP48668 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
KRT6CP48668 AC022898.2-201ENST00000616822 1312 ntBASIC17.45■□□□□ 0.38
KRT6CP48668 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT6CP48668 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT6CP48668 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT6CP48668 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT6CP48668 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
KRT6CP48668 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT6CP48668 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.44■□□□□ 0.38
KRT6CP48668 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT6CP48668 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT6CP48668 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT6CP48668 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT6CP48668 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT6CP48668 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.44■□□□□ 0.38
KRT6CP48668 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.44■□□□□ 0.38
KRT6CP48668 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.44■□□□□ 0.38
KRT6CP48668 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.44■□□□□ 0.38
KRT6CP48668 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.44■□□□□ 0.38
KRT6CP48668 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.44■□□□□ 0.38
KRT6CP48668 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.44■□□□□ 0.38
KRT6CP48668 AC093827.2-201ENST00000512654 315 ntBASIC17.44■□□□□ 0.38
KRT6CP48668 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
KRT6CP48668 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.44■□□□□ 0.38
KRT6CP48668 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT6CP48668 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT6CP48668 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT6CP48668 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
KRT6CP48668 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT6CP48668 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
KRT6CP48668 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT6CP48668 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
KRT6CP48668 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT6CP48668 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT6CP48668 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
KRT6CP48668 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT6CP48668 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT6CP48668 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.43■□□□□ 0.38
KRT6CP48668 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
KRT6CP48668 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.43■□□□□ 0.38
KRT6CP48668 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
KRT6CP48668 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRT6CP48668 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRT6CP48668 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRT6CP48668 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.43■□□□□ 0.38
KRT6CP48668 AL596275.1-201ENST00000423464 877 ntBASIC17.43■□□□□ 0.38
KRT6CP48668 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.43■□□□□ 0.38
KRT6CP48668 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
KRT6CP48668 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRT6CP48668 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
KRT6CP48668 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRT6CP48668 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.43■□□□□ 0.38
KRT6CP48668 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms