Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.89■□□□□ 0.45
HMGCLP35914 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HMGCLP35914 AC246785.2-201ENST00000432512 513 ntBASIC17.89■□□□□ 0.45
HMGCLP35914 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.89■□□□□ 0.45
HMGCLP35914 AP002383.4-201ENST00000442518 975 ntBASIC17.89■□□□□ 0.45
HMGCLP35914 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
HMGCLP35914 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HMGCLP35914 NPAP1P7-201ENST00000613027 823 ntBASIC17.89■□□□□ 0.45
HMGCLP35914 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HMGCLP35914 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.89■□□□□ 0.45
HMGCLP35914 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
HMGCLP35914 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HMGCLP35914 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.89■□□□□ 0.45
HMGCLP35914 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.89■□□□□ 0.45
HMGCLP35914 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
HMGCLP35914 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMGCLP35914 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HMGCLP35914 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.88■□□□□ 0.45
HMGCLP35914 AC018470.1-201ENST00000624790 3129 ntBASIC17.88■□□□□ 0.45
HMGCLP35914 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
HMGCLP35914 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.88■□□□□ 0.45
HMGCLP35914 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HMGCLP35914 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HMGCLP35914 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMGCLP35914 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMGCLP35914 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
HMGCLP35914 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMGCLP35914 AL845331.1-201ENST00000424978 1190 ntBASIC17.88■□□□□ 0.45
HMGCLP35914 ATP5G2P1-201ENST00000433580 426 ntBASIC17.88■□□□□ 0.45
HMGCLP35914 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.88■□□□□ 0.45
HMGCLP35914 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HMGCLP35914 AC011840.4-201ENST00000578471 627 ntBASIC17.88■□□□□ 0.45
HMGCLP35914 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
HMGCLP35914 AC116407.2-201ENST00000613639 860 ntBASIC17.88■□□□□ 0.45
HMGCLP35914 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
HMGCLP35914 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.88■□□□□ 0.45
HMGCLP35914 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
HMGCLP35914 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
HMGCLP35914 KRT18P1-202ENST00000452408 1331 ntBASIC17.88■□□□□ 0.45
HMGCLP35914 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HMGCLP35914 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMGCLP35914 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HMGCLP35914 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMGCLP35914 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMGCLP35914 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HMGCLP35914 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HMGCLP35914 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.88■□□□□ 0.45
HMGCLP35914 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
HMGCLP35914 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HMGCLP35914 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMGCLP35914 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMGCLP35914 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMGCLP35914 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMGCLP35914 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
HMGCLP35914 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMGCLP35914 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
HMGCLP35914 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMGCLP35914 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
HMGCLP35914 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HMGCLP35914 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMGCLP35914 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
HMGCLP35914 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMGCLP35914 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.87■□□□□ 0.45
HMGCLP35914 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
HMGCLP35914 AP002414.4-201ENST00000589764 1148 ntBASIC17.87■□□□□ 0.45
HMGCLP35914 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.87■□□□□ 0.45
HMGCLP35914 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.87■□□□□ 0.45
HMGCLP35914 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HMGCLP35914 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HMGCLP35914 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
HMGCLP35914 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.87■□□□□ 0.45
HMGCLP35914 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.86■□□□□ 0.45
HMGCLP35914 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMGCLP35914 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMGCLP35914 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMGCLP35914 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMGCLP35914 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.86■□□□□ 0.45
HMGCLP35914 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMGCLP35914 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMGCLP35914 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.86■□□□□ 0.45
HMGCLP35914 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMGCLP35914 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
HMGCLP35914 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
HMGCLP35914 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMGCLP35914 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.86■□□□□ 0.45
HMGCLP35914 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMGCLP35914 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMGCLP35914 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.86■□□□□ 0.45
HMGCLP35914 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HMGCLP35914 TPSP2-201ENST00000561760 610 ntBASIC17.86■□□□□ 0.45
HMGCLP35914 MIR3180-1-201ENST00000580374 94 ntBASIC17.86■□□□□ 0.45
HMGCLP35914 MIR3180-3-201ENST00000584616 94 ntBASIC17.86■□□□□ 0.45
HMGCLP35914 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HMGCLP35914 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HMGCLP35914 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HMGCLP35914 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
HMGCLP35914 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HMGCLP35914 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.86■□□□□ 0.45
HMGCLP35914 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HMGCLP35914 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms