Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.55■□□□□ 0.24
ABCD3P28288 AC112698.1-201ENST00000510299 916 ntBASIC16.55■□□□□ 0.24
ABCD3P28288 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ABCD3P28288 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.55■□□□□ 0.24
ABCD3P28288 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.55■□□□□ 0.24
ABCD3P28288 AC092329.2-201ENST00000598402 547 ntBASIC16.55■□□□□ 0.24
ABCD3P28288 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.55■□□□□ 0.24
ABCD3P28288 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
ABCD3P28288 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.55■□□□□ 0.24
ABCD3P28288 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.55■□□□□ 0.24
ABCD3P28288 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ABCD3P28288 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ABCD3P28288 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ABCD3P28288 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ABCD3P28288 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
ABCD3P28288 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ABCD3P28288 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ABCD3P28288 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
ABCD3P28288 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ABCD3P28288 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.54■□□□□ 0.24
ABCD3P28288 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ABCD3P28288 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ABCD3P28288 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
ABCD3P28288 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ABCD3P28288 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ABCD3P28288 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.54■□□□□ 0.24
ABCD3P28288 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.54■□□□□ 0.24
ABCD3P28288 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
ABCD3P28288 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
ABCD3P28288 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ABCD3P28288 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ABCD3P28288 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ABCD3P28288 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.54■□□□□ 0.24
ABCD3P28288 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ABCD3P28288 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ABCD3P28288 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ABCD3P28288 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ABCD3P28288 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ABCD3P28288 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ABCD3P28288 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ABCD3P28288 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ABCD3P28288 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ABCD3P28288 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ABCD3P28288 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.54■□□□□ 0.24
ABCD3P28288 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ABCD3P28288 AC246785.2-201ENST00000432512 513 ntBASIC16.54■□□□□ 0.24
ABCD3P28288 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.54■□□□□ 0.24
ABCD3P28288 HCG4P8-203ENST00000443049 980 ntBASIC16.54■□□□□ 0.24
ABCD3P28288 LINC00265-3P-201ENST00000447588 903 ntBASIC16.54■□□□□ 0.24
ABCD3P28288 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.54■□□□□ 0.24
ABCD3P28288 TOB2P1-201ENST00000469761 992 ntBASIC16.54■□□□□ 0.24
ABCD3P28288 VENTXP7-201ENST00000475503 772 ntBASIC16.54■□□□□ 0.24
ABCD3P28288 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.54■□□□□ 0.24
ABCD3P28288 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.54■□□□□ 0.24
ABCD3P28288 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.54■□□□□ 0.24
ABCD3P28288 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.54■□□□□ 0.24
ABCD3P28288 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.54■□□□□ 0.24
ABCD3P28288 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.54■□□□□ 0.24
ABCD3P28288 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ABCD3P28288 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ABCD3P28288 AL353801.3-201ENST00000609898 542 ntBASIC16.54■□□□□ 0.24
ABCD3P28288 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ABCD3P28288 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.54■□□□□ 0.24
ABCD3P28288 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
ABCD3P28288 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ABCD3P28288 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.54■□□□□ 0.24
ABCD3P28288 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.54■□□□□ 0.24
ABCD3P28288 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.54■□□□□ 0.24
ABCD3P28288 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
ABCD3P28288 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
ABCD3P28288 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.54■□□□□ 0.24
ABCD3P28288 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ABCD3P28288 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.54■□□□□ 0.24
ABCD3P28288 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.54■□□□□ 0.24
ABCD3P28288 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.54■□□□□ 0.24
ABCD3P28288 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ABCD3P28288 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ABCD3P28288 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.54■□□□□ 0.24
ABCD3P28288 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.54■□□□□ 0.24
ABCD3P28288 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
ABCD3P28288 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
ABCD3P28288 AC233702.3-201ENST00000578656 1387 ntBASIC16.53■□□□□ 0.24
ABCD3P28288 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.53■□□□□ 0.24
ABCD3P28288 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ABCD3P28288 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.53■□□□□ 0.24
ABCD3P28288 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ABCD3P28288 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.53■□□□□ 0.24
ABCD3P28288 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.53■□□□□ 0.24
ABCD3P28288 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
ABCD3P28288 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ABCD3P28288 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ABCD3P28288 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ABCD3P28288 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
ABCD3P28288 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
ABCD3P28288 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ABCD3P28288 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ABCD3P28288 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ABCD3P28288 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
ABCD3P28288 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ABCD3P28288 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms