Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.34■□□□□ 0.53
PTPN3P26045 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN3P26045 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PTPN3P26045 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.34■□□□□ 0.53
PTPN3P26045 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN3P26045 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
PTPN3P26045 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN3P26045 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN3P26045 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN3P26045 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.34■□□□□ 0.53
PTPN3P26045 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN3P26045 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN3P26045 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.34■□□□□ 0.53
PTPN3P26045 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN3P26045 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.34■□□□□ 0.53
PTPN3P26045 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.34■□□□□ 0.53
PTPN3P26045 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.34■□□□□ 0.53
PTPN3P26045 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.34■□□□□ 0.53
PTPN3P26045 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN3P26045 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.34■□□□□ 0.53
PTPN3P26045 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.34■□□□□ 0.53
PTPN3P26045 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.34■□□□□ 0.53
PTPN3P26045 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.34■□□□□ 0.53
PTPN3P26045 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
PTPN3P26045 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN3P26045 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN3P26045 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN3P26045 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
PTPN3P26045 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN3P26045 LINC00896-202ENST00000609602 2128 ntBASIC18.34■□□□□ 0.53
PTPN3P26045 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN3P26045 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
PTPN3P26045 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
PTPN3P26045 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.33■□□□□ 0.53
PTPN3P26045 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PTPN3P26045 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PTPN3P26045 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PTPN3P26045 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PTPN3P26045 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
PTPN3P26045 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.33■□□□□ 0.52
PTPN3P26045 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
PTPN3P26045 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PTPN3P26045 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTPN3P26045 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTPN3P26045 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.33■□□□□ 0.52
PTPN3P26045 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.33■□□□□ 0.52
PTPN3P26045 KRT18P21-201ENST00000515767 1272 ntBASIC18.33■□□□□ 0.52
PTPN3P26045 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTPN3P26045 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.33■□□□□ 0.52
PTPN3P26045 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.33■□□□□ 0.52
PTPN3P26045 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PTPN3P26045 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
PTPN3P26045 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTPN3P26045 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTPN3P26045 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTPN3P26045 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PTPN3P26045 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN3P26045 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN3P26045 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN3P26045 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN3P26045 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.32■□□□□ 0.52
PTPN3P26045 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN3P26045 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN3P26045 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
PTPN3P26045 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN3P26045 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN3P26045 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.32■□□□□ 0.52
PTPN3P26045 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.32■□□□□ 0.52
PTPN3P26045 AL671277.2-201ENST00000458060 996 ntBASIC18.32■□□□□ 0.52
PTPN3P26045 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.32■□□□□ 0.52
PTPN3P26045 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN3P26045 GPR32P1-201ENST00000601788 811 ntBASIC18.32■□□□□ 0.52
PTPN3P26045 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.32■□□□□ 0.52
PTPN3P26045 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.32■□□□□ 0.52
PTPN3P26045 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN3P26045 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN3P26045 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.32■□□□□ 0.52
PTPN3P26045 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN3P26045 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.31■□□□□ 0.52
PTPN3P26045 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
PTPN3P26045 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN3P26045 AL353692.3-201ENST00000407031 1396 ntBASIC18.31■□□□□ 0.52
PTPN3P26045 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN3P26045 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN3P26045 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PTPN3P26045 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.31■□□□□ 0.52
PTPN3P26045 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN3P26045 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.31■□□□□ 0.52
PTPN3P26045 TSPY12P-201ENST00000421279 868 ntBASIC18.31■□□□□ 0.52
PTPN3P26045 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.31■□□□□ 0.52
PTPN3P26045 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.31■□□□□ 0.52
PTPN3P26045 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.31■□□□□ 0.52
PTPN3P26045 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN3P26045 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN3P26045 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN3P26045 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.31■□□□□ 0.52
PTPN3P26045 RNF126P1-202ENST00000569893 925 ntBASIC18.31■□□□□ 0.52
PTPN3P26045 AC005332.3-201ENST00000589904 676 ntBASIC18.31■□□□□ 0.52
PTPN3P26045 AC009154.2-201ENST00000621177 724 ntBASIC18.31■□□□□ 0.52
PTPN3P26045 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms