Protein–RNA interactions for Protein: P17655

CAPN2, Calpain-2 catalytic subunit, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2P17655 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.66■□□□□ 0.9
CAPN2P17655 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CAPN2P17655 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CAPN2P17655 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CAPN2P17655 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CAPN2P17655 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CAPN2P17655 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CAPN2P17655 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.66■□□□□ 0.9
CAPN2P17655 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.66■□□□□ 0.9
CAPN2P17655 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.66■□□□□ 0.9
CAPN2P17655 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CAPN2P17655 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20.66■□□□□ 0.9
CAPN2P17655 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CAPN2P17655 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CAPN2P17655 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CAPN2P17655 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CAPN2P17655 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CAPN2P17655 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CAPN2P17655 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CAPN2P17655 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CAPN2P17655 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CAPN2P17655 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CAPN2P17655 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CAPN2P17655 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CAPN2P17655 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CAPN2P17655 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CAPN2P17655 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CAPN2P17655 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC20.65■□□□□ 0.9
CAPN2P17655 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.65■□□□□ 0.9
CAPN2P17655 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CAPN2P17655 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
CAPN2P17655 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CAPN2P17655 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CAPN2P17655 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CAPN2P17655 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CAPN2P17655 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.65■□□□□ 0.9
CAPN2P17655 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC20.65■□□□□ 0.9
CAPN2P17655 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CAPN2P17655 NMU-202ENST00000505262 693 ntTSL 3 BASIC20.65■□□□□ 0.9
CAPN2P17655 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC20.65■□□□□ 0.9
CAPN2P17655 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.65■□□□□ 0.9
CAPN2P17655 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC20.65■□□□□ 0.9
CAPN2P17655 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC20.65■□□□□ 0.9
CAPN2P17655 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CAPN2P17655 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CAPN2P17655 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CAPN2P17655 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CAPN2P17655 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CAPN2P17655 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
CAPN2P17655 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.65■□□□□ 0.9
CAPN2P17655 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CAPN2P17655 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CAPN2P17655 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CAPN2P17655 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
CAPN2P17655 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
CAPN2P17655 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CAPN2P17655 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CAPN2P17655 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CAPN2P17655 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
CAPN2P17655 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC20.64■□□□□ 0.89
CAPN2P17655 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
CAPN2P17655 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CAPN2P17655 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CAPN2P17655 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CAPN2P17655 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CAPN2P17655 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
CAPN2P17655 YBX2P1-201ENST00000394192 760 ntBASIC20.64■□□□□ 0.89
CAPN2P17655 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.64■□□□□ 0.89
CAPN2P17655 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.64■□□□□ 0.89
CAPN2P17655 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.64■□□□□ 0.89
CAPN2P17655 AC091607.1-201ENST00000490318 1060 ntBASIC20.64■□□□□ 0.89
CAPN2P17655 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.64■□□□□ 0.89
CAPN2P17655 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CAPN2P17655 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.64■□□□□ 0.89
CAPN2P17655 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC20.64■□□□□ 0.89
CAPN2P17655 AL049840.3-201ENST00000602669 611 ntBASIC20.64■□□□□ 0.89
CAPN2P17655 AL356488.2-201ENST00000602755 427 ntBASIC20.64■□□□□ 0.89
CAPN2P17655 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC20.64■□□□□ 0.89
CAPN2P17655 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CAPN2P17655 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
CAPN2P17655 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CAPN2P17655 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CAPN2P17655 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
CAPN2P17655 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.64■□□□□ 0.89
CAPN2P17655 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CAPN2P17655 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CAPN2P17655 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.64■□□□□ 0.89
CAPN2P17655 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CAPN2P17655 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.63■□□□□ 0.89
CAPN2P17655 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
CAPN2P17655 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CAPN2P17655 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CAPN2P17655 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.63■□□□□ 0.89
CAPN2P17655 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CAPN2P17655 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CAPN2P17655 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CAPN2P17655 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CAPN2P17655 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CAPN2P17655 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.63■□□□□ 0.89
CAPN2P17655 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms