Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 LSM12-202ENST00000585388 942 ntTSL 3 BASIC21.83■■□□□ 1.08
COL11A2P13942 AC092902.6-201ENST00000641783 218 ntBASIC21.83■■□□□ 1.08
COL11A2P13942 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
COL11A2P13942 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
COL11A2P13942 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
COL11A2P13942 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
COL11A2P13942 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC21.82■■□□□ 1.08
COL11A2P13942 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
COL11A2P13942 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
COL11A2P13942 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
COL11A2P13942 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC21.82■■□□□ 1.08
COL11A2P13942 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL11A2P13942 AL049757.1-201ENST00000616842 1596 ntBASIC21.82■■□□□ 1.08
COL11A2P13942 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL11A2P13942 AC003669.1-201ENST00000334569 611 ntBASIC21.82■■□□□ 1.08
COL11A2P13942 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL11A2P13942 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC21.82■■□□□ 1.08
COL11A2P13942 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
COL11A2P13942 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC21.82■■□□□ 1.08
COL11A2P13942 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC21.82■■□□□ 1.08
COL11A2P13942 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
COL11A2P13942 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC21.82■■□□□ 1.08
COL11A2P13942 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL11A2P13942 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
COL11A2P13942 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
COL11A2P13942 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL11A2P13942 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL11A2P13942 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL11A2P13942 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC21.81■■□□□ 1.08
COL11A2P13942 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
COL11A2P13942 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC21.81■■□□□ 1.08
COL11A2P13942 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL11A2P13942 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL11A2P13942 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC21.81■■□□□ 1.08
COL11A2P13942 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC21.81■■□□□ 1.08
COL11A2P13942 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC21.81■■□□□ 1.08
COL11A2P13942 AL096865.1-201ENST00000606796 927 ntBASIC21.81■■□□□ 1.08
COL11A2P13942 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC21.81■■□□□ 1.08
COL11A2P13942 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
COL11A2P13942 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
COL11A2P13942 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
COL11A2P13942 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC21.81■■□□□ 1.08
COL11A2P13942 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC21.81■■□□□ 1.08
COL11A2P13942 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
COL11A2P13942 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
COL11A2P13942 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
COL11A2P13942 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC21.8■■□□□ 1.08
COL11A2P13942 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC21.8■■□□□ 1.08
COL11A2P13942 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC21.8■■□□□ 1.08
COL11A2P13942 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC21.8■■□□□ 1.08
COL11A2P13942 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC21.8■■□□□ 1.08
COL11A2P13942 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
COL11A2P13942 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.8■■□□□ 1.08
COL11A2P13942 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL11A2P13942 SP100-208ENST00000427101 1922 ntTSL 2 BASIC21.8■■□□□ 1.08
COL11A2P13942 PHGDH-209ENST00000641074 1780 ntBASIC21.8■■□□□ 1.08
COL11A2P13942 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC21.8■■□□□ 1.08
COL11A2P13942 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL11A2P13942 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL11A2P13942 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC21.8■■□□□ 1.08
COL11A2P13942 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.8■■□□□ 1.08
COL11A2P13942 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
COL11A2P13942 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL11A2P13942 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL11A2P13942 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
COL11A2P13942 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC21.8■■□□□ 1.08
COL11A2P13942 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
COL11A2P13942 COX20P2-201ENST00000452636 358 ntBASIC21.8■■□□□ 1.08
COL11A2P13942 AC109322.1-201ENST00000524499 1264 ntBASIC21.8■■□□□ 1.08
COL11A2P13942 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL11A2P13942 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL11A2P13942 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL11A2P13942 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL11A2P13942 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
COL11A2P13942 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL11A2P13942 BCAR1-209ENST00000546196 1340 ntBASIC21.79■■□□□ 1.08
COL11A2P13942 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL11A2P13942 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
COL11A2P13942 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.79■■□□□ 1.08
COL11A2P13942 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL11A2P13942 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC21.79■■□□□ 1.08
COL11A2P13942 CYB561-216ENST00000582297 897 ntTSL 3 BASIC21.79■■□□□ 1.08
COL11A2P13942 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
COL11A2P13942 AC022145.2-201ENST00000598203 171 ntBASIC21.79■■□□□ 1.08
COL11A2P13942 AL513210.1-201ENST00000629608 234 ntBASIC21.79■■□□□ 1.08
COL11A2P13942 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC21.79■■□□□ 1.08
COL11A2P13942 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL11A2P13942 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC21.79■■□□□ 1.08
COL11A2P13942 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL11A2P13942 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL11A2P13942 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL11A2P13942 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
COL11A2P13942 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC21.78■■□□□ 1.08
COL11A2P13942 AC126763.1-201ENST00000552015 2118 ntBASIC21.78■■□□□ 1.08
COL11A2P13942 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
COL11A2P13942 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL11A2P13942 AC023141.5-201ENST00000458585 616 ntBASIC21.78■■□□□ 1.08
COL11A2P13942 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC21.78■■□□□ 1.08
COL11A2P13942 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC21.78■■□□□ 1.08
COL11A2P13942 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms