Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.97■□□□□ 0.63
KRT3P12035 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.97■□□□□ 0.63
KRT3P12035 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.97■□□□□ 0.63
KRT3P12035 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.97■□□□□ 0.63
KRT3P12035 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KRT3P12035 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
KRT3P12035 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
KRT3P12035 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
KRT3P12035 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
KRT3P12035 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT3P12035 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT3P12035 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT3P12035 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT3P12035 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT3P12035 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
KRT3P12035 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT3P12035 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT3P12035 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT3P12035 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.96■□□□□ 0.63
KRT3P12035 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.96■□□□□ 0.63
KRT3P12035 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.96■□□□□ 0.63
KRT3P12035 MIR662-201ENST00000384847 95 ntBASIC18.96■□□□□ 0.63
KRT3P12035 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
KRT3P12035 KRT18P21-201ENST00000515767 1272 ntBASIC18.96■□□□□ 0.63
KRT3P12035 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.96■□□□□ 0.63
KRT3P12035 ZNF444P1-201ENST00000559497 298 ntBASIC18.96■□□□□ 0.63
KRT3P12035 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.96■□□□□ 0.63
KRT3P12035 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.96■□□□□ 0.63
KRT3P12035 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.96■□□□□ 0.63
KRT3P12035 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT3P12035 LINC01311-201ENST00000565162 1445 ntBASIC18.96■□□□□ 0.63
KRT3P12035 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT3P12035 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
KRT3P12035 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
KRT3P12035 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.96■□□□□ 0.63
KRT3P12035 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT3P12035 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
KRT3P12035 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT3P12035 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT3P12035 AC022898.2-201ENST00000616822 1312 ntBASIC18.96■□□□□ 0.63
KRT3P12035 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
KRT3P12035 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KRT3P12035 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KRT3P12035 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
KRT3P12035 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
KRT3P12035 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
KRT3P12035 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KRT3P12035 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
KRT3P12035 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
KRT3P12035 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
KRT3P12035 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KRT3P12035 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
KRT3P12035 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
KRT3P12035 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
KRT3P12035 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.95■□□□□ 0.62
KRT3P12035 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KRT3P12035 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KRT3P12035 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KRT3P12035 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KRT3P12035 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KRT3P12035 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.95■□□□□ 0.62
KRT3P12035 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KRT3P12035 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.95■□□□□ 0.62
KRT3P12035 LINC01238-205ENST00000567549 1107 ntBASIC18.95■□□□□ 0.62
KRT3P12035 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.95■□□□□ 0.62
KRT3P12035 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KRT3P12035 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.95■□□□□ 0.62
KRT3P12035 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KRT3P12035 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KRT3P12035 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.95■□□□□ 0.62
KRT3P12035 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KRT3P12035 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KRT3P12035 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
KRT3P12035 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KRT3P12035 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
KRT3P12035 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KRT3P12035 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
KRT3P12035 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
KRT3P12035 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
KRT3P12035 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KRT3P12035 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
KRT3P12035 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KRT3P12035 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KRT3P12035 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KRT3P12035 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KRT3P12035 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.94■□□□□ 0.62
KRT3P12035 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
KRT3P12035 AP003733.1-201ENST00000491725 852 ntBASIC18.94■□□□□ 0.62
KRT3P12035 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.94■□□□□ 0.62
KRT3P12035 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.94■□□□□ 0.62
KRT3P12035 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.94■□□□□ 0.62
KRT3P12035 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KRT3P12035 AC004263.2-201ENST00000617183 678 ntBASIC18.94■□□□□ 0.62
KRT3P12035 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
KRT3P12035 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KRT3P12035 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.94■□□□□ 0.62
KRT3P12035 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
KRT3P12035 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.94■□□□□ 0.62
KRT3P12035 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.94■□□□□ 0.62
KRT3P12035 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms