Protein–RNA interactions for Protein: P09486

SPARC, SPARC, humanhuman

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCP09486 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.04■□□□□ 0.16
SPARCP09486 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
SPARCP09486 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.04■□□□□ 0.16
SPARCP09486 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SPARCP09486 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SPARCP09486 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
SPARCP09486 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SPARCP09486 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SPARCP09486 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SPARCP09486 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.04■□□□□ 0.16
SPARCP09486 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
SPARCP09486 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SPARCP09486 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SPARCP09486 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.03■□□□□ 0.16
SPARCP09486 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SPARCP09486 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SPARCP09486 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SPARCP09486 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SPARCP09486 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SPARCP09486 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SPARCP09486 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SPARCP09486 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SPARCP09486 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SPARCP09486 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
SPARCP09486 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SPARCP09486 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SPARCP09486 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.03■□□□□ 0.16
SPARCP09486 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SPARCP09486 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
SPARCP09486 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
SPARCP09486 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SPARCP09486 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SPARCP09486 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.03■□□□□ 0.16
SPARCP09486 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SPARCP09486 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.03■□□□□ 0.16
SPARCP09486 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.03■□□□□ 0.16
SPARCP09486 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.03■□□□□ 0.16
SPARCP09486 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.03■□□□□ 0.16
SPARCP09486 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SPARCP09486 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SPARCP09486 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
SPARCP09486 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
SPARCP09486 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SPARCP09486 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SPARCP09486 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SPARCP09486 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.03■□□□□ 0.16
SPARCP09486 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.03■□□□□ 0.16
SPARCP09486 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.03■□□□□ 0.16
SPARCP09486 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SPARCP09486 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SPARCP09486 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SPARCP09486 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SPARCP09486 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SPARCP09486 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.02■□□□□ 0.16
SPARCP09486 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.02■□□□□ 0.16
SPARCP09486 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
SPARCP09486 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SPARCP09486 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SPARCP09486 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
SPARCP09486 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
SPARCP09486 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.02■□□□□ 0.16
SPARCP09486 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
SPARCP09486 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SPARCP09486 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.02■□□□□ 0.16
SPARCP09486 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
SPARCP09486 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.02■□□□□ 0.16
SPARCP09486 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.02■□□□□ 0.16
SPARCP09486 SEC1P-202ENST00000473944 940 ntBASIC16.02■□□□□ 0.16
SPARCP09486 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.02■□□□□ 0.16
SPARCP09486 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SPARCP09486 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SPARCP09486 AC010947.1-201ENST00000623454 693 ntBASIC16.02■□□□□ 0.16
SPARCP09486 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.02■□□□□ 0.16
SPARCP09486 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
SPARCP09486 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.02■□□□□ 0.16
SPARCP09486 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
SPARCP09486 KRT18P55-202ENST00000578578 1546 ntBASIC16.02■□□□□ 0.15
SPARCP09486 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SPARCP09486 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.02■□□□□ 0.15
SPARCP09486 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SPARCP09486 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SPARCP09486 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SPARCP09486 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SPARCP09486 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.02■□□□□ 0.15
SPARCP09486 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.02■□□□□ 0.15
SPARCP09486 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SPARCP09486 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.02■□□□□ 0.15
SPARCP09486 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SPARCP09486 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SPARCP09486 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
SPARCP09486 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SPARCP09486 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SPARCP09486 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
SPARCP09486 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SPARCP09486 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SPARCP09486 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SPARCP09486 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
SPARCP09486 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SPARCP09486 MMP23A-201ENST00000234610 1017 ntBASIC16.01■□□□□ 0.15
SPARCP09486 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms