Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
APOA4P06727 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.04■□□□□ 0.48
APOA4P06727 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
APOA4P06727 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.04■□□□□ 0.48
APOA4P06727 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
APOA4P06727 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
APOA4P06727 RNF152P1-201ENST00000397754 604 ntBASIC18.04■□□□□ 0.48
APOA4P06727 AK4P3-201ENST00000418260 669 ntBASIC18.04■□□□□ 0.48
APOA4P06727 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.04■□□□□ 0.48
APOA4P06727 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.04■□□□□ 0.48
APOA4P06727 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
APOA4P06727 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
APOA4P06727 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
APOA4P06727 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.04■□□□□ 0.48
APOA4P06727 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.04■□□□□ 0.48
APOA4P06727 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.04■□□□□ 0.48
APOA4P06727 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.04■□□□□ 0.48
APOA4P06727 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
APOA4P06727 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
APOA4P06727 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
APOA4P06727 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
APOA4P06727 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.04■□□□□ 0.48
APOA4P06727 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
APOA4P06727 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
APOA4P06727 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
APOA4P06727 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
APOA4P06727 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
APOA4P06727 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
APOA4P06727 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.03■□□□□ 0.48
APOA4P06727 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
APOA4P06727 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.03■□□□□ 0.48
APOA4P06727 AC099343.3-201ENST00000605834 2503 ntBASIC18.03■□□□□ 0.48
APOA4P06727 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
APOA4P06727 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
APOA4P06727 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
APOA4P06727 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.03■□□□□ 0.48
APOA4P06727 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
APOA4P06727 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
APOA4P06727 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
APOA4P06727 RCN1P1-201ENST00000400413 996 ntBASIC18.03■□□□□ 0.48
APOA4P06727 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.03■□□□□ 0.48
APOA4P06727 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
APOA4P06727 RN7SL850P-201ENST00000579959 291 ntBASIC18.03■□□□□ 0.48
APOA4P06727 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
APOA4P06727 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.03■□□□□ 0.48
APOA4P06727 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.03■□□□□ 0.48
APOA4P06727 AL157888.1-201ENST00000631930 593 ntBASIC18.03■□□□□ 0.48
APOA4P06727 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.03■□□□□ 0.48
APOA4P06727 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.03■□□□□ 0.48
APOA4P06727 AC012317.2-201ENST00000623305 2251 ntBASIC18.03■□□□□ 0.48
APOA4P06727 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
APOA4P06727 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.03■□□□□ 0.48
APOA4P06727 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
APOA4P06727 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.03■□□□□ 0.48
APOA4P06727 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
APOA4P06727 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
APOA4P06727 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.03■□□□□ 0.48
APOA4P06727 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
APOA4P06727 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
APOA4P06727 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
APOA4P06727 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.03■□□□□ 0.48
APOA4P06727 PRORSD1P-202ENST00000563365 2154 ntBASIC18.03■□□□□ 0.48
APOA4P06727 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
APOA4P06727 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.03■□□□□ 0.48
APOA4P06727 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
APOA4P06727 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.02■□□□□ 0.48
APOA4P06727 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
APOA4P06727 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
APOA4P06727 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
APOA4P06727 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
APOA4P06727 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
APOA4P06727 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
APOA4P06727 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
APOA4P06727 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
APOA4P06727 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
APOA4P06727 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
APOA4P06727 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.02■□□□□ 0.48
APOA4P06727 TMPOP1-202ENST00000424642 1267 ntBASIC18.02■□□□□ 0.48
APOA4P06727 TSPY5P-201ENST00000426936 936 ntBASIC18.02■□□□□ 0.48
APOA4P06727 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
APOA4P06727 HOMER2P1-201ENST00000455653 964 ntBASIC18.02■□□□□ 0.48
APOA4P06727 RASA4DP-201ENST00000460726 1199 ntBASIC18.02■□□□□ 0.48
APOA4P06727 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.02■□□□□ 0.48
APOA4P06727 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.02■□□□□ 0.48
APOA4P06727 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.02■□□□□ 0.48
APOA4P06727 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
APOA4P06727 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.02■□□□□ 0.48
APOA4P06727 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.02■□□□□ 0.48
APOA4P06727 AC006011.2-201ENST00000621313 1158 ntBASIC18.02■□□□□ 0.48
APOA4P06727 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
APOA4P06727 PKD1P1-201ENST00000458669 6805 ntBASIC18.02■□□□□ 0.47
APOA4P06727 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.02■□□□□ 0.47
APOA4P06727 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.02■□□□□ 0.47
APOA4P06727 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
APOA4P06727 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
APOA4P06727 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
APOA4P06727 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
APOA4P06727 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
APOA4P06727 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
APOA4P06727 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms