Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RB1P06400 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC18.94■□□□□ 0.62
RB1P06400 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.94■□□□□ 0.62
RB1P06400 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
RB1P06400 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.94■□□□□ 0.62
RB1P06400 AL645939.2-201ENST00000427340 991 ntBASIC18.94■□□□□ 0.62
RB1P06400 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.94■□□□□ 0.62
RB1P06400 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.94■□□□□ 0.62
RB1P06400 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.94■□□□□ 0.62
RB1P06400 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.94■□□□□ 0.62
RB1P06400 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RB1P06400 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RB1P06400 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RB1P06400 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.94■□□□□ 0.62
RB1P06400 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
RB1P06400 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.94■□□□□ 0.62
RB1P06400 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
RB1P06400 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RB1P06400 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.93■□□□□ 0.62
RB1P06400 GMCL1P1-201ENST00000463439 1581 ntBASIC18.93■□□□□ 0.62
RB1P06400 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RB1P06400 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
RB1P06400 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
RB1P06400 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RB1P06400 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RB1P06400 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
RB1P06400 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
RB1P06400 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RB1P06400 CNN2P11-201ENST00000429351 262 ntBASIC18.93■□□□□ 0.62
RB1P06400 HTR5BP-201ENST00000430851 1154 ntBASIC18.93■□□□□ 0.62
RB1P06400 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
RB1P06400 ALG1L5P-201ENST00000482043 771 ntBASIC18.93■□□□□ 0.62
RB1P06400 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
RB1P06400 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RB1P06400 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
RB1P06400 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
RB1P06400 AC092865.6-201ENST00000642101 219 ntBASIC18.93■□□□□ 0.62
RB1P06400 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.93■□□□□ 0.62
RB1P06400 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.93■□□□□ 0.62
RB1P06400 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.93■□□□□ 0.62
RB1P06400 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RB1P06400 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
RB1P06400 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RB1P06400 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RB1P06400 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RB1P06400 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RB1P06400 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RB1P06400 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RB1P06400 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.92■□□□□ 0.62
RB1P06400 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.92■□□□□ 0.62
RB1P06400 COX5BP2-201ENST00000392354 334 ntBASIC18.92■□□□□ 0.62
RB1P06400 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RB1P06400 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.92■□□□□ 0.62
RB1P06400 HCG4B-203ENST00000450128 991 ntBASIC18.92■□□□□ 0.62
RB1P06400 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.92■□□□□ 0.62
RB1P06400 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
RB1P06400 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RB1P06400 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
RB1P06400 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
RB1P06400 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RB1P06400 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RB1P06400 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RB1P06400 AC132938.6-201ENST00000623828 1655 ntBASIC18.92■□□□□ 0.62
RB1P06400 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.91■□□□□ 0.62
RB1P06400 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RB1P06400 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RB1P06400 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RB1P06400 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RB1P06400 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RB1P06400 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.91■□□□□ 0.62
RB1P06400 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
RB1P06400 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.91■□□□□ 0.62
RB1P06400 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.91■□□□□ 0.62
RB1P06400 IGHV3-65-201ENST00000523210 341 ntBASIC18.91■□□□□ 0.62
RB1P06400 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
RB1P06400 AP002472.1-201ENST00000577490 586 ntBASIC18.91■□□□□ 0.62
RB1P06400 AC008667.4-201ENST00000607370 168 ntBASIC18.91■□□□□ 0.62
RB1P06400 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RB1P06400 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RB1P06400 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
RB1P06400 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.91■□□□□ 0.62
RB1P06400 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.91■□□□□ 0.62
RB1P06400 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.91■□□□□ 0.62
RB1P06400 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.91■□□□□ 0.62
RB1P06400 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RB1P06400 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RB1P06400 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RB1P06400 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RB1P06400 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RB1P06400 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.9■□□□□ 0.62
RB1P06400 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
RB1P06400 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.9■□□□□ 0.62
RB1P06400 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RB1P06400 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RB1P06400 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RB1P06400 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RB1P06400 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.9■□□□□ 0.62
RB1P06400 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.9■□□□□ 0.62
RB1P06400 AC108073.2-201ENST00000464002 357 ntBASIC18.9■□□□□ 0.62
RB1P06400 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms