Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRGV3P03979 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRGV3P03979 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRGV3P03979 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC14.16□□□□□ -0.14
TRGV3P03979 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRGV3P03979 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRGV3P03979 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRGV3P03979 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
TRGV3P03979 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC14.16□□□□□ -0.14
TRGV3P03979 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRGV3P03979 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRGV3P03979 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC14.16□□□□□ -0.14
TRGV3P03979 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRGV3P03979 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC14.16□□□□□ -0.14
TRGV3P03979 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRGV3P03979 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRGV3P03979 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
TRGV3P03979 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC14.16□□□□□ -0.14
TRGV3P03979 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC14.16□□□□□ -0.14
TRGV3P03979 AL136038.3-201ENST00000561909 1096 ntBASIC14.16□□□□□ -0.14
TRGV3P03979 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC14.16□□□□□ -0.14
TRGV3P03979 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
TRGV3P03979 DBP-204ENST00000599385 709 ntTSL 3 BASIC14.16□□□□□ -0.14
TRGV3P03979 REXO1L9P-201ENST00000604264 2108 ntBASIC14.16□□□□□ -0.14
TRGV3P03979 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRGV3P03979 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRGV3P03979 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRGV3P03979 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC14.16□□□□□ -0.14
TRGV3P03979 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC14.16□□□□□ -0.14
TRGV3P03979 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TRGV3P03979 POR-209ENST00000439269 1858 ntTSL 2 BASIC14.16□□□□□ -0.14
TRGV3P03979 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRGV3P03979 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRGV3P03979 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRGV3P03979 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRGV3P03979 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC14.16□□□□□ -0.14
TRGV3P03979 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRGV3P03979 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TRGV3P03979 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV3P03979 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV3P03979 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV3P03979 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC14.15□□□□□ -0.14
TRGV3P03979 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV3P03979 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC14.15□□□□□ -0.14
TRGV3P03979 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV3P03979 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV3P03979 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV3P03979 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV3P03979 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC14.15□□□□□ -0.14
TRGV3P03979 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV3P03979 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC14.15□□□□□ -0.14
TRGV3P03979 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV3P03979 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV3P03979 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV3P03979 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV3P03979 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV3P03979 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TRGV3P03979 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC14.15□□□□□ -0.14
TRGV3P03979 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV3P03979 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV3P03979 HES2-202ENST00000377836 507 ntTSL 2 BASIC14.15□□□□□ -0.14
TRGV3P03979 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC14.15□□□□□ -0.14
TRGV3P03979 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC14.15□□□□□ -0.14
TRGV3P03979 RNF146-204ENST00000476956 884 ntTSL 2 BASIC14.15□□□□□ -0.14
TRGV3P03979 AC113404.2-201ENST00000507884 177 ntBASIC14.15□□□□□ -0.14
TRGV3P03979 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC14.15□□□□□ -0.14
TRGV3P03979 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC14.15□□□□□ -0.14
TRGV3P03979 NT5C-211ENST00000582170 653 ntTSL 3 BASIC14.15□□□□□ -0.14
TRGV3P03979 GPR32P1-201ENST00000601788 811 ntBASIC14.15□□□□□ -0.14
TRGV3P03979 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TRGV3P03979 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC14.15□□□□□ -0.14
TRGV3P03979 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV3P03979 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
TRGV3P03979 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV3P03979 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
TRGV3P03979 AC135050.7-201ENST00000624508 2218 ntBASIC14.15□□□□□ -0.14
TRGV3P03979 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV3P03979 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV3P03979 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV3P03979 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV3P03979 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV3P03979 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRGV3P03979 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TRGV3P03979 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
TRGV3P03979 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRGV3P03979 LINC00602-201ENST00000629776 2065 ntBASIC14.14□□□□□ -0.15
TRGV3P03979 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRGV3P03979 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRGV3P03979 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRGV3P03979 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
TRGV3P03979 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRGV3P03979 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRGV3P03979 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TRGV3P03979 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRGV3P03979 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
TRGV3P03979 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRGV3P03979 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TRGV3P03979 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRGV3P03979 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRGV3P03979 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms