Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT6AP02538 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KRT6AP02538 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
KRT6AP02538 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KRT6AP02538 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.45■□□□□ 0.38
KRT6AP02538 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT6AP02538 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KRT6AP02538 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KRT6AP02538 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT6AP02538 AC022898.2-201ENST00000616822 1312 ntBASIC17.45■□□□□ 0.38
KRT6AP02538 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT6AP02538 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT6AP02538 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
KRT6AP02538 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT6AP02538 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.44■□□□□ 0.38
KRT6AP02538 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT6AP02538 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT6AP02538 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT6AP02538 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
KRT6AP02538 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT6AP02538 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.44■□□□□ 0.38
KRT6AP02538 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT6AP02538 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT6AP02538 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.44■□□□□ 0.38
KRT6AP02538 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.44■□□□□ 0.38
KRT6AP02538 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.44■□□□□ 0.38
KRT6AP02538 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.44■□□□□ 0.38
KRT6AP02538 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.44■□□□□ 0.38
KRT6AP02538 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.44■□□□□ 0.38
KRT6AP02538 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.44■□□□□ 0.38
KRT6AP02538 AC093827.2-201ENST00000512654 315 ntBASIC17.44■□□□□ 0.38
KRT6AP02538 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
KRT6AP02538 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.44■□□□□ 0.38
KRT6AP02538 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT6AP02538 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT6AP02538 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT6AP02538 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
KRT6AP02538 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT6AP02538 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
KRT6AP02538 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT6AP02538 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
KRT6AP02538 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT6AP02538 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
KRT6AP02538 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.44■□□□□ 0.38
KRT6AP02538 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
KRT6AP02538 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT6AP02538 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.43■□□□□ 0.38
KRT6AP02538 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
KRT6AP02538 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.43■□□□□ 0.38
KRT6AP02538 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.43■□□□□ 0.38
KRT6AP02538 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
KRT6AP02538 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRT6AP02538 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
KRT6AP02538 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRT6AP02538 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRT6AP02538 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRT6AP02538 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.43■□□□□ 0.38
KRT6AP02538 AL596275.1-201ENST00000423464 877 ntBASIC17.43■□□□□ 0.38
KRT6AP02538 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.43■□□□□ 0.38
KRT6AP02538 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
KRT6AP02538 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRT6AP02538 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRT6AP02538 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.43■□□□□ 0.38
KRT6AP02538 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRT6AP02538 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRT6AP02538 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.43■□□□□ 0.38
KRT6AP02538 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
KRT6AP02538 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.43■□□□□ 0.38
KRT6AP02538 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.42■□□□□ 0.38
KRT6AP02538 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.42■□□□□ 0.38
KRT6AP02538 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT6AP02538 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
KRT6AP02538 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
KRT6AP02538 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.42■□□□□ 0.38
KRT6AP02538 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT6AP02538 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
KRT6AP02538 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT6AP02538 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.42■□□□□ 0.38
KRT6AP02538 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
KRT6AP02538 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT6AP02538 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT6AP02538 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT6AP02538 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KRT6AP02538 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
KRT6AP02538 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT6AP02538 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT6AP02538 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT6AP02538 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT6AP02538 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.42■□□□□ 0.38
KRT6AP02538 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.42■□□□□ 0.38
KRT6AP02538 AC034232.1-201ENST00000506026 1064 ntBASIC17.42■□□□□ 0.38
KRT6AP02538 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.42■□□□□ 0.38
KRT6AP02538 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
KRT6AP02538 AL157888.1-201ENST00000631930 593 ntBASIC17.42■□□□□ 0.38
KRT6AP02538 AC141257.4-201ENST00000634557 245 ntBASIC17.42■□□□□ 0.38
KRT6AP02538 AC136944.6-201ENST00000634818 245 ntBASIC17.42■□□□□ 0.38
KRT6AP02538 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
KRT6AP02538 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
KRT6AP02538 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KRT6AP02538 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms