Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
TRBV12-3P01733 UPK3BP1-201ENST00000428678 509 ntBASIC13.9□□□□□ -0.18
TRBV12-3P01733 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC13.9□□□□□ -0.18
TRBV12-3P01733 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV12-3P01733 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC13.9□□□□□ -0.18
TRBV12-3P01733 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
TRBV12-3P01733 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC13.9□□□□□ -0.18
TRBV12-3P01733 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV12-3P01733 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
TRBV12-3P01733 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC13.9□□□□□ -0.18
TRBV12-3P01733 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV12-3P01733 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV12-3P01733 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV12-3P01733 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV12-3P01733 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
TRBV12-3P01733 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
TRBV12-3P01733 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV12-3P01733 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRBV12-3P01733 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC13.9□□□□□ -0.18
TRBV12-3P01733 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
TRBV12-3P01733 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
TRBV12-3P01733 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
TRBV12-3P01733 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV12-3P01733 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV12-3P01733 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV12-3P01733 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV12-3P01733 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
TRBV12-3P01733 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV12-3P01733 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV12-3P01733 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV12-3P01733 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC13.89□□□□□ -0.19
TRBV12-3P01733 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV12-3P01733 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV12-3P01733 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV12-3P01733 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV12-3P01733 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV12-3P01733 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV12-3P01733 DDT-203ENST00000403754 569 ntTSL 3 BASIC13.89□□□□□ -0.19
TRBV12-3P01733 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC13.89□□□□□ -0.19
TRBV12-3P01733 DDT-206ENST00000430101 573 ntTSL 2 BASIC13.89□□□□□ -0.19
TRBV12-3P01733 KRT18P65-201ENST00000439811 1286 ntBASIC13.89□□□□□ -0.19
TRBV12-3P01733 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV12-3P01733 TSSC2-201ENST00000450217 709 ntBASIC13.89□□□□□ -0.19
TRBV12-3P01733 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV12-3P01733 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV12-3P01733 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC13.89□□□□□ -0.19
TRBV12-3P01733 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV12-3P01733 AC069148.1-201ENST00000608741 768 ntBASIC13.89□□□□□ -0.19
TRBV12-3P01733 AL592071.1-201ENST00000611956 408 ntBASIC13.89□□□□□ -0.19
TRBV12-3P01733 AC124864.1-201ENST00000623408 392 ntBASIC13.89□□□□□ -0.19
TRBV12-3P01733 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC13.89□□□□□ -0.19
TRBV12-3P01733 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
TRBV12-3P01733 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
TRBV12-3P01733 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
TRBV12-3P01733 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV12-3P01733 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
TRBV12-3P01733 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC13.89□□□□□ -0.19
TRBV12-3P01733 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC13.89□□□□□ -0.19
TRBV12-3P01733 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
TRBV12-3P01733 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV12-3P01733 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV12-3P01733 FLJ13224-201ENST00000313737 1514 ntBASIC13.89□□□□□ -0.19
TRBV12-3P01733 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
TRBV12-3P01733 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
TRBV12-3P01733 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC13.89□□□□□ -0.19
TRBV12-3P01733 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV12-3P01733 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV12-3P01733 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRBV12-3P01733 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV12-3P01733 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
TRBV12-3P01733 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV12-3P01733 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
TRBV12-3P01733 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC13.88□□□□□ -0.19
TRBV12-3P01733 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV12-3P01733 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC13.88□□□□□ -0.19
TRBV12-3P01733 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC13.88□□□□□ -0.19
TRBV12-3P01733 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV12-3P01733 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV12-3P01733 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV12-3P01733 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
TRBV12-3P01733 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV12-3P01733 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC13.88□□□□□ -0.19
TRBV12-3P01733 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV12-3P01733 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV12-3P01733 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC13.88□□□□□ -0.19
TRBV12-3P01733 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC13.88□□□□□ -0.19
TRBV12-3P01733 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV12-3P01733 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV12-3P01733 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
TRBV12-3P01733 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV12-3P01733 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV12-3P01733 CHCHD2P8-201ENST00000429873 447 ntBASIC13.88□□□□□ -0.19
TRBV12-3P01733 AP002383.4-201ENST00000442518 975 ntBASIC13.88□□□□□ -0.19
TRBV12-3P01733 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV12-3P01733 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC13.88□□□□□ -0.19
TRBV12-3P01733 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC13.88□□□□□ -0.19
TRBV12-3P01733 IGHV3-41-201ENST00000613121 348 ntBASIC13.88□□□□□ -0.19
TRBV12-3P01733 GXYLT1P4-201ENST00000613576 1192 ntBASIC13.88□□□□□ -0.19
TRBV12-3P01733 AC009154.2-201ENST00000621177 724 ntBASIC13.88□□□□□ -0.19
TRBV12-3P01733 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms