Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
IFNA1P01562 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IFNA1P01562 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IFNA1P01562 CROCCP2-202ENST00000412962 2773 ntBASIC14.26□□□□□ -0.13
IFNA1P01562 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
IFNA1P01562 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC14.26□□□□□ -0.13
IFNA1P01562 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
IFNA1P01562 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
IFNA1P01562 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IFNA1P01562 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
IFNA1P01562 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.26□□□□□ -0.13
IFNA1P01562 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.26□□□□□ -0.13
IFNA1P01562 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
IFNA1P01562 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC14.25□□□□□ -0.13
IFNA1P01562 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
IFNA1P01562 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
IFNA1P01562 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
IFNA1P01562 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IFNA1P01562 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IFNA1P01562 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
IFNA1P01562 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
IFNA1P01562 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
IFNA1P01562 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
IFNA1P01562 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IFNA1P01562 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
IFNA1P01562 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.25□□□□□ -0.13
IFNA1P01562 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
IFNA1P01562 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IFNA1P01562 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
IFNA1P01562 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IFNA1P01562 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
IFNA1P01562 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
IFNA1P01562 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IFNA1P01562 AC142381.2-201ENST00000566120 298 ntBASIC14.25□□□□□ -0.13
IFNA1P01562 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC14.25□□□□□ -0.13
IFNA1P01562 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC14.25□□□□□ -0.13
IFNA1P01562 AC133963.1-201ENST00000504166 1679 ntBASIC14.25□□□□□ -0.13
IFNA1P01562 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
IFNA1P01562 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
IFNA1P01562 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
IFNA1P01562 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
IFNA1P01562 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.25□□□□□ -0.13
IFNA1P01562 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IFNA1P01562 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
IFNA1P01562 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IFNA1P01562 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
IFNA1P01562 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IFNA1P01562 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IFNA1P01562 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
IFNA1P01562 BOC-212ENST00000485230 2173 ntTSL 2 BASIC14.24□□□□□ -0.13
IFNA1P01562 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
IFNA1P01562 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC14.24□□□□□ -0.13
IFNA1P01562 KRT8P3-201ENST00000519669 1449 ntBASIC14.24□□□□□ -0.13
IFNA1P01562 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC14.24□□□□□ -0.13
IFNA1P01562 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC14.24□□□□□ -0.13
IFNA1P01562 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
IFNA1P01562 CRK-204ENST00000574295 1391 ntTSL 5 BASIC14.24□□□□□ -0.13
IFNA1P01562 CICP6-201ENST00000457191 2729 ntBASIC14.24□□□□□ -0.13
IFNA1P01562 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.24□□□□□ -0.13
IFNA1P01562 HTR7P1-201ENST00000538670 1336 ntBASIC14.24□□□□□ -0.13
IFNA1P01562 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC14.24□□□□□ -0.13
IFNA1P01562 AP000593.1-201ENST00000393668 712 ntBASIC14.24□□□□□ -0.13
IFNA1P01562 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC14.24□□□□□ -0.13
IFNA1P01562 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC14.24□□□□□ -0.13
IFNA1P01562 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
IFNA1P01562 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC14.24□□□□□ -0.13
IFNA1P01562 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
IFNA1P01562 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
IFNA1P01562 AL355312.1-201ENST00000407115 2176 ntBASIC14.24□□□□□ -0.13
IFNA1P01562 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.24□□□□□ -0.13
IFNA1P01562 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
IFNA1P01562 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
IFNA1P01562 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC14.24□□□□□ -0.13
IFNA1P01562 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
IFNA1P01562 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.24□□□□□ -0.13
IFNA1P01562 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
IFNA1P01562 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
IFNA1P01562 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
IFNA1P01562 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
IFNA1P01562 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
IFNA1P01562 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
IFNA1P01562 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC14.24□□□□□ -0.13
IFNA1P01562 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
IFNA1P01562 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
IFNA1P01562 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
IFNA1P01562 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
IFNA1P01562 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
IFNA1P01562 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
IFNA1P01562 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
IFNA1P01562 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
IFNA1P01562 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
IFNA1P01562 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
IFNA1P01562 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
IFNA1P01562 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
IFNA1P01562 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
IFNA1P01562 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC14.23□□□□□ -0.13
IFNA1P01562 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
IFNA1P01562 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC14.23□□□□□ -0.13
IFNA1P01562 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
IFNA1P01562 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms