Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN1O95832 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN1O95832 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN1O95832 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.04■□□□□ 0.16
CLDN1O95832 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.04■□□□□ 0.16
CLDN1O95832 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
CLDN1O95832 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CLDN1O95832 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN1O95832 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN1O95832 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN1O95832 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN1O95832 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN1O95832 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.04■□□□□ 0.16
CLDN1O95832 FAM8A3P-201ENST00000427218 844 ntBASIC16.04■□□□□ 0.16
CLDN1O95832 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.04■□□□□ 0.16
CLDN1O95832 AP006288.1-201ENST00000446065 395 ntBASIC16.04■□□□□ 0.16
CLDN1O95832 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.04■□□□□ 0.16
CLDN1O95832 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CLDN1O95832 AC002347.1-201ENST00000569543 541 ntBASIC16.04■□□□□ 0.16
CLDN1O95832 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.04■□□□□ 0.16
CLDN1O95832 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.04■□□□□ 0.16
CLDN1O95832 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CLDN1O95832 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.04■□□□□ 0.16
CLDN1O95832 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN1O95832 AC006333.2-201ENST00000607957 2099 ntBASIC16.04■□□□□ 0.16
CLDN1O95832 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.04■□□□□ 0.16
CLDN1O95832 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN1O95832 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN1O95832 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.04■□□□□ 0.16
CLDN1O95832 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CLDN1O95832 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CLDN1O95832 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN1O95832 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.03■□□□□ 0.16
CLDN1O95832 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.03■□□□□ 0.16
CLDN1O95832 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.03■□□□□ 0.16
CLDN1O95832 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN1O95832 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN1O95832 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
CLDN1O95832 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC16.03■□□□□ 0.16
CLDN1O95832 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN1O95832 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN1O95832 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN1O95832 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN1O95832 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.03■□□□□ 0.16
CLDN1O95832 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.03■□□□□ 0.16
CLDN1O95832 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.03■□□□□ 0.16
CLDN1O95832 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN1O95832 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
CLDN1O95832 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
CLDN1O95832 AC023274.1-201ENST00000418278 595 ntBASIC16.03■□□□□ 0.16
CLDN1O95832 AC007967.2-201ENST00000432613 625 ntBASIC16.03■□□□□ 0.16
CLDN1O95832 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.03■□□□□ 0.16
CLDN1O95832 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.03■□□□□ 0.16
CLDN1O95832 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN1O95832 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.03■□□□□ 0.16
CLDN1O95832 OR7E14P-202ENST00000530490 1290 ntBASIC16.03■□□□□ 0.16
CLDN1O95832 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.03■□□□□ 0.16
CLDN1O95832 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.03■□□□□ 0.16
CLDN1O95832 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN1O95832 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.03■□□□□ 0.16
CLDN1O95832 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.03■□□□□ 0.16
CLDN1O95832 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN1O95832 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.03■□□□□ 0.16
CLDN1O95832 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CLDN1O95832 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.03■□□□□ 0.16
CLDN1O95832 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN1O95832 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CLDN1O95832 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN1O95832 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CLDN1O95832 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN1O95832 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN1O95832 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN1O95832 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN1O95832 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN1O95832 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN1O95832 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN1O95832 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.03■□□□□ 0.16
CLDN1O95832 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN1O95832 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CLDN1O95832 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN1O95832 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN1O95832 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN1O95832 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN1O95832 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CLDN1O95832 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.02■□□□□ 0.16
CLDN1O95832 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN1O95832 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN1O95832 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN1O95832 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN1O95832 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN1O95832 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.02■□□□□ 0.16
CLDN1O95832 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CLDN1O95832 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN1O95832 OR6D1P-202ENST00000641007 5290 ntBASIC16.02■□□□□ 0.16
CLDN1O95832 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CLDN1O95832 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN1O95832 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CLDN1O95832 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.02■□□□□ 0.16
CLDN1O95832 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN1O95832 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms