Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDH8O95206 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDH8O95206 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDH8O95206 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDH8O95206 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDH8O95206 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDH8O95206 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
PCDH8O95206 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PCDH8O95206 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH8O95206 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PCDH8O95206 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
PCDH8O95206 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDH8O95206 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH8O95206 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH8O95206 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PCDH8O95206 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.92■□□□□ 0.46
PCDH8O95206 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.92■□□□□ 0.46
PCDH8O95206 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH8O95206 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH8O95206 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH8O95206 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
PCDH8O95206 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.92■□□□□ 0.46
PCDH8O95206 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDH8O95206 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.92■□□□□ 0.46
PCDH8O95206 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDH8O95206 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH8O95206 AP002469.2-201ENST00000531724 424 ntBASIC17.92■□□□□ 0.46
PCDH8O95206 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
PCDH8O95206 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.92■□□□□ 0.46
PCDH8O95206 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.92■□□□□ 0.46
PCDH8O95206 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH8O95206 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH8O95206 PKD1P1-201ENST00000458669 6805 ntBASIC17.92■□□□□ 0.46
PCDH8O95206 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH8O95206 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH8O95206 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH8O95206 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH8O95206 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDH8O95206 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH8O95206 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH8O95206 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH8O95206 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH8O95206 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.91■□□□□ 0.46
PCDH8O95206 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
PCDH8O95206 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH8O95206 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH8O95206 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
PCDH8O95206 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
PCDH8O95206 TNXA-203ENST00000507684 2038 ntBASIC17.91■□□□□ 0.46
PCDH8O95206 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH8O95206 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH8O95206 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH8O95206 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
PCDH8O95206 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDH8O95206 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
PCDH8O95206 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.91■□□□□ 0.46
PCDH8O95206 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
PCDH8O95206 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
PCDH8O95206 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.91■□□□□ 0.46
PCDH8O95206 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH8O95206 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.91■□□□□ 0.46
PCDH8O95206 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.91■□□□□ 0.46
PCDH8O95206 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH8O95206 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH8O95206 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
PCDH8O95206 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH8O95206 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH8O95206 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH8O95206 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
PCDH8O95206 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH8O95206 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH8O95206 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
PCDH8O95206 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH8O95206 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH8O95206 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDH8O95206 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH8O95206 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH8O95206 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH8O95206 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDH8O95206 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.91■□□□□ 0.46
PCDH8O95206 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH8O95206 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH8O95206 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH8O95206 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.9■□□□□ 0.46
PCDH8O95206 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH8O95206 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH8O95206 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH8O95206 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDH8O95206 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH8O95206 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH8O95206 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH8O95206 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH8O95206 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH8O95206 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH8O95206 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH8O95206 AC079776.4-201ENST00000511039 504 ntBASIC17.9■□□□□ 0.46
PCDH8O95206 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDH8O95206 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH8O95206 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.9■□□□□ 0.46
PCDH8O95206 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms