Protein–RNA interactions for Protein: O94993

SOX30, Transcription factor SOX-30, humanhuman

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30O94993 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SOX30O94993 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SOX30O94993 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SOX30O94993 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
SOX30O94993 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.76■□□□□ 0.27
SOX30O94993 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SOX30O94993 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SOX30O94993 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
SOX30O94993 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.75■□□□□ 0.27
SOX30O94993 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
SOX30O94993 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.75■□□□□ 0.27
SOX30O94993 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SOX30O94993 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SOX30O94993 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.75■□□□□ 0.27
SOX30O94993 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
SOX30O94993 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SOX30O94993 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SOX30O94993 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.75■□□□□ 0.27
SOX30O94993 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SOX30O94993 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SOX30O94993 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SOX30O94993 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SOX30O94993 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SOX30O94993 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SOX30O94993 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SOX30O94993 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SOX30O94993 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SOX30O94993 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.75■□□□□ 0.27
SOX30O94993 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
SOX30O94993 AK4P3-201ENST00000418260 669 ntBASIC16.75■□□□□ 0.27
SOX30O94993 AC117947.1-201ENST00000427448 529 ntBASIC16.75■□□□□ 0.27
SOX30O94993 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.75■□□□□ 0.27
SOX30O94993 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SOX30O94993 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.75■□□□□ 0.27
SOX30O94993 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SOX30O94993 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SOX30O94993 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SOX30O94993 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.75■□□□□ 0.27
SOX30O94993 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SOX30O94993 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SOX30O94993 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SOX30O94993 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SOX30O94993 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SOX30O94993 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SOX30O94993 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.75■□□□□ 0.27
SOX30O94993 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.75■□□□□ 0.27
SOX30O94993 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
SOX30O94993 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SOX30O94993 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.74■□□□□ 0.27
SOX30O94993 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SOX30O94993 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
SOX30O94993 PKD1P1-201ENST00000458669 6805 ntBASIC16.74■□□□□ 0.27
SOX30O94993 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SOX30O94993 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SOX30O94993 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.74■□□□□ 0.27
SOX30O94993 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SOX30O94993 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SOX30O94993 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SOX30O94993 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.74■□□□□ 0.27
SOX30O94993 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.74■□□□□ 0.27
SOX30O94993 LINC00167-201ENST00000530583 1419 ntBASIC16.74■□□□□ 0.27
SOX30O94993 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.74■□□□□ 0.27
SOX30O94993 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SOX30O94993 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SOX30O94993 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.74■□□□□ 0.27
SOX30O94993 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
SOX30O94993 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.74■□□□□ 0.27
SOX30O94993 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.74■□□□□ 0.27
SOX30O94993 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.74■□□□□ 0.27
SOX30O94993 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
SOX30O94993 AC009154.2-201ENST00000621177 724 ntBASIC16.74■□□□□ 0.27
SOX30O94993 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SOX30O94993 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
SOX30O94993 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SOX30O94993 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SOX30O94993 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SOX30O94993 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.74■□□□□ 0.27
SOX30O94993 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SOX30O94993 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SOX30O94993 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SOX30O94993 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
SOX30O94993 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SOX30O94993 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SOX30O94993 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SOX30O94993 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
SOX30O94993 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SOX30O94993 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.74■□□□□ 0.27
SOX30O94993 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.74■□□□□ 0.27
SOX30O94993 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SOX30O94993 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SOX30O94993 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SOX30O94993 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SOX30O94993 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SOX30O94993 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
SOX30O94993 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SOX30O94993 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
SOX30O94993 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SOX30O94993 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SOX30O94993 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.73■□□□□ 0.27
SOX30O94993 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms