Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC27.85■■■□□ 2.05
PCF11O94913 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC27.85■■■□□ 2.05
PCF11O94913 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
PCF11O94913 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
PCF11O94913 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC27.85■■■□□ 2.05
PCF11O94913 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
PCF11O94913 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
PCF11O94913 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
PCF11O94913 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC27.84■■■□□ 2.05
PCF11O94913 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
PCF11O94913 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC27.84■■■□□ 2.05
PCF11O94913 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
PCF11O94913 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
PCF11O94913 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
PCF11O94913 CALY-203ENST00000368558 825 ntTSL 5 BASIC27.84■■■□□ 2.05
PCF11O94913 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC27.84■■■□□ 2.05
PCF11O94913 MSRA-206ENST00000521209 814 ntTSL 3 BASIC27.84■■■□□ 2.05
PCF11O94913 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC27.84■■■□□ 2.05
PCF11O94913 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC27.84■■■□□ 2.05
PCF11O94913 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC27.84■■■□□ 2.05
PCF11O94913 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC27.84■■■□□ 2.05
PCF11O94913 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC27.84■■■□□ 2.05
PCF11O94913 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC27.84■■■□□ 2.05
PCF11O94913 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
PCF11O94913 BX323043.1-201ENST00000641006 1765 ntBASIC27.84■■■□□ 2.05
PCF11O94913 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC27.84■■■□□ 2.05
PCF11O94913 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC27.84■■■□□ 2.05
PCF11O94913 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
PCF11O94913 AC135776.1-201ENST00000319817 2481 ntBASIC27.83■■■□□ 2.05
PCF11O94913 CD9-202ENST00000382515 1229 ntTSL 5 BASIC27.83■■■□□ 2.05
PCF11O94913 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC27.83■■■□□ 2.05
PCF11O94913 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC27.83■■■□□ 2.05
PCF11O94913 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC27.83■■■□□ 2.05
PCF11O94913 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC27.83■■■□□ 2.05
PCF11O94913 AC009949.1-201ENST00000623048 1830 ntBASIC27.83■■■□□ 2.05
PCF11O94913 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
PCF11O94913 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC27.83■■■□□ 2.05
PCF11O94913 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
PCF11O94913 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC27.83■■■□□ 2.05
PCF11O94913 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
PCF11O94913 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC27.83■■■□□ 2.05
PCF11O94913 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC27.82■■■□□ 2.04
PCF11O94913 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC27.82■■■□□ 2.04
PCF11O94913 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC27.82■■■□□ 2.04
PCF11O94913 RPS8P6-201ENST00000426177 609 ntBASIC27.82■■■□□ 2.04
PCF11O94913 AL591424.1-201ENST00000442569 1213 ntBASIC27.82■■■□□ 2.04
PCF11O94913 PON3-205ENST00000451904 1053 ntTSL 3 BASIC27.82■■■□□ 2.04
PCF11O94913 HLA-J-202ENST00000469281 1241 ntBASIC27.82■■■□□ 2.04
PCF11O94913 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC27.82■■■□□ 2.04
PCF11O94913 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC27.82■■■□□ 2.04
PCF11O94913 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC27.82■■■□□ 2.04
PCF11O94913 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC27.82■■■□□ 2.04
PCF11O94913 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC27.82■■■□□ 2.04
PCF11O94913 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
PCF11O94913 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
PCF11O94913 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
PCF11O94913 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC27.82■■■□□ 2.04
PCF11O94913 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
PCF11O94913 RPS2P28-201ENST00000314255 741 ntBASIC27.82■■■□□ 2.04
PCF11O94913 CIPC-205ENST00000555437 566 ntTSL 3 BASIC27.82■■■□□ 2.04
PCF11O94913 AC006557.2-201ENST00000592985 1240 ntBASIC27.82■■■□□ 2.04
PCF11O94913 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC27.81■■■□□ 2.04
PCF11O94913 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC27.81■■■□□ 2.04
PCF11O94913 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
PCF11O94913 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
PCF11O94913 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC27.81■■■□□ 2.04
PCF11O94913 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC27.81■■■□□ 2.04
PCF11O94913 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
PCF11O94913 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC27.81■■■□□ 2.04
PCF11O94913 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC27.81■■■□□ 2.04
PCF11O94913 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC27.81■■■□□ 2.04
PCF11O94913 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
PCF11O94913 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
PCF11O94913 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
PCF11O94913 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
PCF11O94913 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC27.81■■■□□ 2.04
PCF11O94913 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC27.81■■■□□ 2.04
PCF11O94913 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC27.81■■■□□ 2.04
PCF11O94913 CYMP-203ENST00000474680 1263 ntBASIC27.81■■■□□ 2.04
PCF11O94913 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC27.81■■■□□ 2.04
PCF11O94913 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC27.81■■■□□ 2.04
PCF11O94913 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
PCF11O94913 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC27.81■■■□□ 2.04
PCF11O94913 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
PCF11O94913 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC27.8■■■□□ 2.04
PCF11O94913 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
PCF11O94913 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
PCF11O94913 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC27.8■■■□□ 2.04
PCF11O94913 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
PCF11O94913 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
PCF11O94913 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
PCF11O94913 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC27.8■■■□□ 2.04
PCF11O94913 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC27.8■■■□□ 2.04
PCF11O94913 CRCP-205ENST00000431089 942 ntTSL 2 BASIC27.8■■■□□ 2.04
PCF11O94913 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
PCF11O94913 AC108751.1-201ENST00000490852 363 ntBASIC27.8■■■□□ 2.04
PCF11O94913 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC27.8■■■□□ 2.04
PCF11O94913 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC27.8■■■□□ 2.04
PCF11O94913 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
PCF11O94913 AC098818.2-201ENST00000564925 2320 ntBASIC27.8■■■□□ 2.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms