Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.39■□□□□ 0.21
RNF13O43567 SEC1P-202ENST00000473944 940 ntBASIC16.39■□□□□ 0.21
RNF13O43567 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF13O43567 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.39■□□□□ 0.21
RNF13O43567 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.39■□□□□ 0.21
RNF13O43567 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.39■□□□□ 0.21
RNF13O43567 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.39■□□□□ 0.21
RNF13O43567 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
RNF13O43567 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.39■□□□□ 0.21
RNF13O43567 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF13O43567 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF13O43567 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.39■□□□□ 0.21
RNF13O43567 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF13O43567 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
RNF13O43567 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.39■□□□□ 0.21
RNF13O43567 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF13O43567 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF13O43567 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF13O43567 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
RNF13O43567 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF13O43567 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.39■□□□□ 0.21
RNF13O43567 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.39■□□□□ 0.21
RNF13O43567 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF13O43567 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF13O43567 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF13O43567 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF13O43567 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RNF13O43567 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF13O43567 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RNF13O43567 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF13O43567 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.38■□□□□ 0.21
RNF13O43567 AC099398.1-201ENST00000567919 2776 ntBASIC16.38■□□□□ 0.21
RNF13O43567 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
RNF13O43567 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.38■□□□□ 0.21
RNF13O43567 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
RNF13O43567 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
RNF13O43567 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF13O43567 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF13O43567 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF13O43567 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.38■□□□□ 0.21
RNF13O43567 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF13O43567 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.38■□□□□ 0.21
RNF13O43567 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.38■□□□□ 0.21
RNF13O43567 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RNF13O43567 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RNF13O43567 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF13O43567 LIN28AP1-201ENST00000429574 405 ntBASIC16.38■□□□□ 0.21
RNF13O43567 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.38■□□□□ 0.21
RNF13O43567 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.38■□□□□ 0.21
RNF13O43567 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RNF13O43567 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.38■□□□□ 0.21
RNF13O43567 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF13O43567 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
RNF13O43567 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RNF13O43567 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF13O43567 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF13O43567 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.38■□□□□ 0.21
RNF13O43567 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF13O43567 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF13O43567 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.38■□□□□ 0.21
RNF13O43567 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF13O43567 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF13O43567 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF13O43567 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.38■□□□□ 0.21
RNF13O43567 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.37■□□□□ 0.21
RNF13O43567 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RNF13O43567 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RNF13O43567 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.37■□□□□ 0.21
RNF13O43567 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.37■□□□□ 0.21
RNF13O43567 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF13O43567 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.37■□□□□ 0.21
RNF13O43567 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
RNF13O43567 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RNF13O43567 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
RNF13O43567 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.37■□□□□ 0.21
RNF13O43567 ATP5G1P1-201ENST00000448724 379 ntBASIC16.37■□□□□ 0.21
RNF13O43567 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RNF13O43567 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.37■□□□□ 0.21
RNF13O43567 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.37■□□□□ 0.21
RNF13O43567 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF13O43567 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
RNF13O43567 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF13O43567 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
RNF13O43567 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF13O43567 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF13O43567 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.37■□□□□ 0.21
RNF13O43567 LINC01126-201ENST00000623515 1646 ntBASIC16.37■□□□□ 0.21
RNF13O43567 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF13O43567 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF13O43567 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF13O43567 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RNF13O43567 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RNF13O43567 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF13O43567 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
RNF13O43567 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.36■□□□□ 0.21
RNF13O43567 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RNF13O43567 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
RNF13O43567 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.36■□□□□ 0.21
RNF13O43567 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF13O43567 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms