Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.66■□□□□ 0.9
PRPF3O43395 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PRPF3O43395 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRPF3O43395 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
PRPF3O43395 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
PRPF3O43395 PPIH-202ENST00000372549 327 ntTSL 3 BASIC20.66■□□□□ 0.9
PRPF3O43395 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PRPF3O43395 AC096633.1-201ENST00000422446 749 ntBASIC20.66■□□□□ 0.9
PRPF3O43395 AC246785.2-201ENST00000432512 513 ntBASIC20.66■□□□□ 0.9
PRPF3O43395 ATP5G2P1-201ENST00000433580 426 ntBASIC20.66■□□□□ 0.9
PRPF3O43395 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.66■□□□□ 0.9
PRPF3O43395 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC20.66■□□□□ 0.9
PRPF3O43395 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PRPF3O43395 BCL10-202ENST00000620248 774 ntTSL 5 BASIC20.66■□□□□ 0.9
PRPF3O43395 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
PRPF3O43395 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PRPF3O43395 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
PRPF3O43395 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC20.66■□□□□ 0.9
PRPF3O43395 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PRPF3O43395 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
PRPF3O43395 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.66■□□□□ 0.9
PRPF3O43395 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
PRPF3O43395 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PRPF3O43395 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.66■□□□□ 0.9
PRPF3O43395 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRPF3O43395 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRPF3O43395 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.66■□□□□ 0.9
PRPF3O43395 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRPF3O43395 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PRPF3O43395 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PRPF3O43395 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.65■□□□□ 0.9
PRPF3O43395 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PRPF3O43395 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRPF3O43395 AC012317.2-201ENST00000623305 2251 ntBASIC20.65■□□□□ 0.9
PRPF3O43395 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRPF3O43395 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRPF3O43395 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.65■□□□□ 0.9
PRPF3O43395 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PRPF3O43395 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRPF3O43395 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRPF3O43395 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.65■□□□□ 0.9
PRPF3O43395 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRPF3O43395 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PRPF3O43395 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRPF3O43395 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRPF3O43395 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC20.65■□□□□ 0.9
PRPF3O43395 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.65■□□□□ 0.9
PRPF3O43395 AC097374.2-201ENST00000618617 1306 ntBASIC20.65■□□□□ 0.9
PRPF3O43395 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRPF3O43395 DDX43P3-201ENST00000441064 443 ntBASIC20.65■□□□□ 0.9
PRPF3O43395 AC091607.1-201ENST00000490318 1060 ntBASIC20.65■□□□□ 0.9
PRPF3O43395 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC20.65■□□□□ 0.9
PRPF3O43395 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PRPF3O43395 AC005336.2-201ENST00000593183 939 ntBASIC20.65■□□□□ 0.9
PRPF3O43395 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.65■□□□□ 0.9
PRPF3O43395 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.65■□□□□ 0.9
PRPF3O43395 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRPF3O43395 AC134043.2-201ENST00000624206 2238 ntBASIC20.65■□□□□ 0.9
PRPF3O43395 GNE-204ENST00000539208 2190 ntTSL 2 BASIC20.65■□□□□ 0.9
PRPF3O43395 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.65■□□□□ 0.9
PRPF3O43395 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRPF3O43395 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PRPF3O43395 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PRPF3O43395 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.65■□□□□ 0.9
PRPF3O43395 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PRPF3O43395 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PRPF3O43395 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.64■□□□□ 0.9
PRPF3O43395 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRPF3O43395 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.64■□□□□ 0.89
PRPF3O43395 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.64■□□□□ 0.89
PRPF3O43395 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRPF3O43395 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRPF3O43395 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRPF3O43395 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRPF3O43395 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
PRPF3O43395 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRPF3O43395 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRPF3O43395 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.64■□□□□ 0.89
PRPF3O43395 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.64■□□□□ 0.89
PRPF3O43395 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRPF3O43395 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.64■□□□□ 0.89
PRPF3O43395 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRPF3O43395 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.64■□□□□ 0.89
PRPF3O43395 AP005901.3-202ENST00000581653 237 ntBASIC20.64■□□□□ 0.89
PRPF3O43395 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.64■□□□□ 0.89
PRPF3O43395 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
PRPF3O43395 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRPF3O43395 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
PRPF3O43395 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
PRPF3O43395 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PRPF3O43395 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRPF3O43395 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
PRPF3O43395 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRPF3O43395 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.63■□□□□ 0.89
PRPF3O43395 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
PRPF3O43395 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRPF3O43395 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRPF3O43395 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRPF3O43395 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PRPF3O43395 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms