Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
PHGDHO43175 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.91■□□□□ 0.46
PHGDHO43175 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
PHGDHO43175 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PHGDHO43175 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.91■□□□□ 0.46
PHGDHO43175 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
PHGDHO43175 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PHGDHO43175 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.91■□□□□ 0.46
PHGDHO43175 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.91■□□□□ 0.46
PHGDHO43175 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.91■□□□□ 0.46
PHGDHO43175 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PHGDHO43175 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PHGDHO43175 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
PHGDHO43175 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
PHGDHO43175 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PHGDHO43175 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PHGDHO43175 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
PHGDHO43175 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.9■□□□□ 0.46
PHGDHO43175 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.9■□□□□ 0.46
PHGDHO43175 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PHGDHO43175 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PHGDHO43175 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PHGDHO43175 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PHGDHO43175 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.9■□□□□ 0.46
PHGDHO43175 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
PHGDHO43175 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
PHGDHO43175 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PHGDHO43175 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.9■□□□□ 0.46
PHGDHO43175 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
PHGDHO43175 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
PHGDHO43175 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.9■□□□□ 0.46
PHGDHO43175 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.9■□□□□ 0.46
PHGDHO43175 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.9■□□□□ 0.46
PHGDHO43175 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.9■□□□□ 0.46
PHGDHO43175 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PHGDHO43175 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.9■□□□□ 0.46
PHGDHO43175 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
PHGDHO43175 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PHGDHO43175 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PHGDHO43175 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PHGDHO43175 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.9■□□□□ 0.46
PHGDHO43175 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PHGDHO43175 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
PHGDHO43175 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PHGDHO43175 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
PHGDHO43175 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PHGDHO43175 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
PHGDHO43175 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
PHGDHO43175 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.89■□□□□ 0.45
PHGDHO43175 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.89■□□□□ 0.45
PHGDHO43175 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PHGDHO43175 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PHGDHO43175 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PHGDHO43175 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PHGDHO43175 AL355312.1-201ENST00000407115 2176 ntBASIC17.89■□□□□ 0.45
PHGDHO43175 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PHGDHO43175 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PHGDHO43175 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PHGDHO43175 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.89■□□□□ 0.45
PHGDHO43175 DUTP2-201ENST00000519164 463 ntBASIC17.89■□□□□ 0.45
PHGDHO43175 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.89■□□□□ 0.45
PHGDHO43175 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.89■□□□□ 0.45
PHGDHO43175 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PHGDHO43175 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PHGDHO43175 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PHGDHO43175 AL157888.1-201ENST00000631930 593 ntBASIC17.89■□□□□ 0.45
PHGDHO43175 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.89■□□□□ 0.45
PHGDHO43175 AC092865.7-201ENST00000641832 219 ntBASIC17.89■□□□□ 0.45
PHGDHO43175 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
PHGDHO43175 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PHGDHO43175 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PHGDHO43175 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PHGDHO43175 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PHGDHO43175 AC141586.5-201ENST00000624546 2050 ntBASIC17.89■□□□□ 0.45
PHGDHO43175 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PHGDHO43175 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
PHGDHO43175 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.88■□□□□ 0.45
PHGDHO43175 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PHGDHO43175 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PHGDHO43175 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
PHGDHO43175 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PHGDHO43175 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
PHGDHO43175 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PHGDHO43175 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PHGDHO43175 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.88■□□□□ 0.45
PHGDHO43175 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.88■□□□□ 0.45
PHGDHO43175 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.88■□□□□ 0.45
PHGDHO43175 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.88■□□□□ 0.45
PHGDHO43175 NEK4P2-201ENST00000580004 1012 ntBASIC17.88■□□□□ 0.45
PHGDHO43175 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PHGDHO43175 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PHGDHO43175 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PHGDHO43175 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
PHGDHO43175 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PHGDHO43175 LINC01568-207ENST00000641790 1380 ntBASIC17.88■□□□□ 0.45
PHGDHO43175 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
PHGDHO43175 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
PHGDHO43175 LINC00167-201ENST00000530583 1419 ntBASIC17.88■□□□□ 0.45
PHGDHO43175 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PHGDHO43175 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms