Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.85■□□□□ 0.29
RRP8O43159 AP000974.1-201ENST00000623909 2387 ntBASIC16.85■□□□□ 0.29
RRP8O43159 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RRP8O43159 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RRP8O43159 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RRP8O43159 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.85■□□□□ 0.29
RRP8O43159 HLA-J-203ENST00000494367 1087 ntBASIC16.85■□□□□ 0.29
RRP8O43159 KRT18P41-201ENST00000518924 1277 ntBASIC16.85■□□□□ 0.29
RRP8O43159 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.85■□□□□ 0.29
RRP8O43159 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.85■□□□□ 0.29
RRP8O43159 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.85■□□□□ 0.29
RRP8O43159 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.85■□□□□ 0.29
RRP8O43159 FP475955.4-201ENST00000623131 1990 ntBASIC16.85■□□□□ 0.29
RRP8O43159 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RRP8O43159 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RRP8O43159 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RRP8O43159 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
RRP8O43159 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
RRP8O43159 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.85■□□□□ 0.29
RRP8O43159 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RRP8O43159 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RRP8O43159 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.84■□□□□ 0.29
RRP8O43159 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RRP8O43159 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RRP8O43159 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RRP8O43159 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.84■□□□□ 0.29
RRP8O43159 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RRP8O43159 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.84■□□□□ 0.29
RRP8O43159 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RRP8O43159 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RRP8O43159 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RRP8O43159 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RRP8O43159 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.84■□□□□ 0.29
RRP8O43159 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RRP8O43159 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.84■□□□□ 0.29
RRP8O43159 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.84■□□□□ 0.29
RRP8O43159 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.84■□□□□ 0.29
RRP8O43159 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RRP8O43159 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.84■□□□□ 0.29
RRP8O43159 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RRP8O43159 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RRP8O43159 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
RRP8O43159 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RRP8O43159 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.84■□□□□ 0.29
RRP8O43159 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
RRP8O43159 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.84■□□□□ 0.29
RRP8O43159 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.84■□□□□ 0.29
RRP8O43159 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RRP8O43159 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RRP8O43159 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RRP8O43159 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.84■□□□□ 0.29
RRP8O43159 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.84■□□□□ 0.29
RRP8O43159 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.84■□□□□ 0.29
RRP8O43159 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
RRP8O43159 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RRP8O43159 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
RRP8O43159 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.84■□□□□ 0.29
RRP8O43159 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RRP8O43159 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.84■□□□□ 0.29
RRP8O43159 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RRP8O43159 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RRP8O43159 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RRP8O43159 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RRP8O43159 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RRP8O43159 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RRP8O43159 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RRP8O43159 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RRP8O43159 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
RRP8O43159 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RRP8O43159 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RRP8O43159 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RRP8O43159 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.83■□□□□ 0.28
RRP8O43159 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RRP8O43159 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
RRP8O43159 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RRP8O43159 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RRP8O43159 CRYGEP-201ENST00000412192 528 ntBASIC16.83■□□□□ 0.28
RRP8O43159 AC092474.2-201ENST00000424288 719 ntBASIC16.83■□□□□ 0.28
RRP8O43159 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.83■□□□□ 0.28
RRP8O43159 MKNK2P1-201ENST00000437526 628 ntBASIC16.83■□□□□ 0.28
RRP8O43159 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.83■□□□□ 0.28
RRP8O43159 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.83■□□□□ 0.28
RRP8O43159 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.83■□□□□ 0.28
RRP8O43159 AC136632.2-201ENST00000512891 861 ntBASIC16.83■□□□□ 0.28
RRP8O43159 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.83■□□□□ 0.28
RRP8O43159 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RRP8O43159 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
RRP8O43159 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
RRP8O43159 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.83■□□□□ 0.28
RRP8O43159 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.83■□□□□ 0.28
RRP8O43159 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
RRP8O43159 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.83■□□□□ 0.28
RRP8O43159 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RRP8O43159 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.83■□□□□ 0.28
RRP8O43159 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
RRP8O43159 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RRP8O43159 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RRP8O43159 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RRP8O43159 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RRP8O43159 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms